Qi Zhao

According to our database, Qi Zhao authored at least 13 papers between 2014 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

qPTM: an updated database for PTM dynamics in human, mouse, rat and yeast.

Kai Yu, Ye Wang, Yongqiang Zheng, Zekun Liu, Qingfeng Zhang, Siyu Wang, Qi Zhao, Xiaolong Zhang, Xiaoxing Li, Rui-Hua Xu, Zexian Liu

Nucleic Acids Res., January, 2023

dSCOPE: a software to detect sequences critical for liquid-liquid phase separation.

Kai Yu, Zekun Liu, Haoyang Cheng, Shihua Li, Qingfeng Zhang, Jia Liu, Huai-Qiang Ju, Zhixiang Zuo, Qi Zhao, Shiyang Kang, Zexian Liu

Briefings Bioinform., January, 2023

2022

IBS 2.0: an upgraded illustrator for the visualization of biological sequences.

Yubin Xie, Huiqin Li, Xiaotong Luo, Hongyu Li, Qiuyuan Gao, Luowanyue Zhang, Yuyan Teng, Qi Zhao, Zhixiang Zuo, Jian Ren

Nucleic Acids Res., 2022

MeRIPseqPipe: an integrated analysis pipeline for MeRIP-seq data based on Nextflow.

Xiaoqiong Bao, Kaiyu Zhu, Xuefei Liu, Zhihang Chen, Ziwei Luo, Qi Zhao, Jian Ren, Zhixiang Zuo

Bioinform., 2022

Deciphering clonal dynamics and metastatic routines in a rare patient of synchronous triple-primary tumors and multiple metastases with MPTevol.

Qingjian Chen, Qi-Nian Wu, Yu-Ming Rong, Shixiang Wang, Zhixiang Zuo, Long Bai, Bei Zhang, Shuqiang Yuan, Qi Zhao

Briefings Bioinform., 2022

2021

RMVar: an updated database of functional variants involved in RNA modifications.

Xiaotong Luo, Huiqin Li, Jiaqi Liang, Qi Zhao, Yubin Xie, Jian Ren, Zhixiang Zuo

Nucleic Acids Res., 2021

gutMEGA: a database of the human gut MEtaGenome Atlas.

Qingfeng Zhang, Kai Yu, Shihua Li, Xiaolong Zhang, Qi Zhao, Xia Zhao, Zekun Liu, Han Cheng, Zexian Liu, Xiaoxing Li

Briefings Bioinform., 2021

2020

BBCancer: an expression atlas of blood-based biomarkers in the early diagnosis of cancers.

Zhixiang Zuo, Huanjing Hu, Qingxian Xu, Xiaotong Luo, Di Peng, Kaiyu Zhu, Qi Zhao, Yubin Xie, Jian Ren

Nucleic Acids Res., 2020

CrossICC: iterative consensus clustering of cross-platform gene expression data without adjusting batch effect.

Qi Zhao, Yu Sun, Zekun Liu, Hongwan Zhang, Xingyang Li, Kaiyu Zhu, Zexian Liu, Jian Ren, Zhixiang Zuo

Briefings Bioinform., 2020

Deep learning based prediction of reversible HAT/HDAC-specific lysine acetylation.

Kai Yu, Qingfeng Zhang, Zekun Liu, Yimeng Du, Xinjiao Gao, Qi Zhao, Han Cheng, Xiaoxing Li, Zexian Liu

Briefings Bioinform., 2020

2019

qPhos: a database of protein phosphorylation dynamics in humans.

Kai Yu, Qingfeng Zhang, Zekun Liu, Qi Zhao, Xiaolong Zhang, Yan Wang, Zi-Xian Wang, Ying Jin, Xiaoxing Li, Zexian Liu, Rui-Hua Xu

Nucleic Acids Res., 2019

2015

IBS: an illustrator for the presentation and visualization of biological sequences.

Wenzhong Liu, Yubin Xie, Jiyong Ma, Xiaotong Luo, Peng Nie, Zhixiang Zuo, Urs Lahrmann, Qi Zhao, Yueyuan Zheng, Yong Zhao, Yu Xue, Jian Ren

Bioinform., 2015

2014

GPS-SUMO: a tool for the prediction of sumoylation sites and SUMO-interaction motifs.

Qi Zhao, Yubin Xie, Yueyuan Zheng, Shuai Jiang, Wenzhong Liu, Weiping Mu, Zexian Liu, Yong Zhao, Yu Xue, Jian Ren

Nucleic Acids Res., 2014