Qiang Yu

According to our database, Qiang Yu authored at least 14 papers between 2012 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

A Method for Predicting DNA Motif Length Based On Deep Learning.

Qiang Yu, Xiao Zhang, Yana Hu, Shengpin Chen, Liying Yang

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

LDSSNV: A Linkage Disequilibrium-Based Method for the Detection of Somatic Single-Nucleotide Variants.

Jingfen Lan, Wenxiang Chen, Ganggang Yin, Haque A. K. Alvi, Kun Xie, Qiang Yu, Xiguo Yuan

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

2019

A new algorithm for DNA motif discovery using multiple sample sequence sets.

Qiang Yu, Xiang Zhao, Hongwei Huo

J. Bioinform. Comput. Biol., 2019

A New Efficient Algorithm for Quorum Planted Motif Search on Large DNA Datasets.

Qiang Yu, Xiao Zhang

IEEE Access, 2019

2018

SamSelect: a sample sequence selection algorithm for quorum planted motif search on large DNA datasets.

Qiang Yu, Dingbang Wei, Hongwei Huo

BMC Bioinform., 2018

2016

RefSelect: a reference sequence selection algorithm for planted (<i>l</i>, <i>d</i>) motif search.

Qiang Yu, Hongwei Huo, Ruixing Zhao, Dazheng Feng, Jeffrey Scott Vitter, Jun Huan

BMC Bioinform., 2016

CS2A: A Compressed Suffix Array-Based Method for Short Read Alignment.

Hongwei Huo, Zhigang Sun, Shuangjiang Li, Jeffrey Scott Vitter, Xinkun Wang, Qiang Yu, Jun Huan

Proceedings of the 2016 Data Compression Conference, 2016

2015

An Efficient Exact Algorithm for the Motif Stem Search Problem over Large Alphabets.

Qiang Yu, Hongwei Huo, Jeffrey Scott Vitter, Jun Huan, Yakov Nekrich

IEEE ACM Trans. Comput. Biol. Bioinform., 2015

Reference sequence selection for motif searches.

Qiang Yu, Hongwei Huo, Ruixing Zhao, Dazheng Feng, Jeffrey Scott Vitter, Jun Huan

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

A Data-Aware FM-index.

Hongwei Huo, Longgang Chen, Heng Zhao, Jeffrey Scott Vitter, Yakov Nekrich, Qiang Yu

Proceedings of the Seventeenth Workshop on Algorithm Engineering and Experiments, 2015

2014

An efficient motif finding algorithm for large DNA data sets.

Qiang Yu, Hongwei Huo, Xiaoyang Chen, Haitao Guo, Jeffrey Scott Vitter, Jun Huan

Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

2013

A Heuristic Cluster-Based EM Algorithm for the Planted (L, d) Problem.

Yipu Zhang, Hongwei Huo, Qiang Yu

J. Bioinform. Comput. Biol., 2013

StemFinder: An efficient algorithm for searching motif stems over large alphabets.

Qiang Yu, Hongwei Huo, Jeffrey Scott Vitter, Jun Huan, Yakov Nekrich

Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012

A MapReduce-based Algorithm for Motif Search.

Hongwei Huo, Shuai Lin, Qiang Yu, Yipu Zhang, Vojislav Stojkovic

Proceedings of the 26th IEEE International Parallel and Distributed Processing Symposium Workshops & PhD Forum, 2012