Weihua Geng

According to our database, Weihua Geng authored at least 21 papers between 2011 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

A new boundary condition for the nonlinear Poisson-Boltzmann equation in electrostatic analysis of proteins.

Sylvia Amihere, Yiming Ren, Weihua Geng, Shan Zhao

J. Comput. Phys., 2025

2024

Bridging Eulerian and Lagrangian Poisson-Boltzmann solvers by ESES.

Sheik Ahmed Ullah, Xin Yang, Benjamin Jones, Shan Zhao, Weihua Geng, Guo-Wei Wei

J. Comput. Chem., 2024

Optimized parallelization of boundary integral Poisson-Boltzmann solvers.

Xin Yang, Elyssa Sliheet, Reece Iriye, Daniel R. Reynolds, Weihua Geng

Comput. Phys. Commun., 2024

A DNN Biophysics Model with Topological and Electrostatic Features.

Elyssa Sliheet, Md Abu Talha, Weihua Geng

CoRR, 2024

Comparison of three matched interface and boundary (MIB) schemes for solving the nonlinear Poisson-Boltzmann equation.

Yiming Ren, Sylvia Amihere, Weihua Geng, Shan Zhao

Commun. Inf. Syst., 2024

2023

A Cartesian FMM-accelerated Galerkin boundary integral Poisson-Boltzmann solver.

Jiahui Chen, Johannes Tausch, Weihua Geng

J. Comput. Phys., April, 2023

Integral equation method for the 1D steady-state Poisson-Nernst-Planck equations.

Zhen Chao, Weihua Geng, Robert Krasny

CoRR, 2023

2022

Computing electrostatic binding energy with the TABI Poisson-Boltzmann solver.

Leighton Wilson, Jingzhen Hu, Jiahui Chen, Robert Krasny, Weihua Geng

Commun. Inf. Syst., 2022

Benchmarking electrostatic free energy of the nonlinear Poisson-Boltzmann model for the Kirkwood sphere.

Sylvia Amihere, Weihua Geng, Shan Zhao

Commun. Inf. Syst., 2022

2021

Regularization methods for the Poisson-Boltzmann equation: Comparison and accuracy recovery.

Arum Lee, Weihua Geng, Shan Zhao

J. Comput. Phys., 2021

Cyclically parallelized treecode for fast computations of electrostatic interactions on molecular surfaces.

Jiahui Chen, Weihua Geng, Daniel R. Reynolds

Comput. Phys. Commun., 2021

MLIMC: Machine learning-based implicit-solvent Monte Carlo.

Jiahui Chen, Weihua Geng, Guo-Wei Wei

CoRR, 2021

2018

On preconditioning the treecode-accelerated boundary integral (TABI) Poisson-Boltzmann solver.

Jiahui Chen, Weihua Geng

J. Comput. Phys., 2018

Role of combinatorial complexity in genetic networks.

Weihua Geng, Xin Yang

Commun. Inf. Syst., 2018

2017

A two-component Matched Interface and Boundary (MIB) regularization for charge singularity in implicit solvation.

Weihua Geng, Shan Zhao

J. Comput. Phys., 2017

2015

Parallel Computing of the Adaptive N-Body Treecode Algorithm for Solving Boundary Integral Poisson-Boltzmann Equation.

Jiahui Chen, Weihua Geng

Proceedings of the High Performance Computing and Applications, 2015

2013

A treecode-accelerated boundary integral Poisson-Boltzmann solver for electrostatics of solvated biomolecules.

Weihua Geng, Robert Krasny

J. Comput. Phys., 2013

Parallel higher-order boundary integral electrostatics computation on molecular surfaces with curved triangulation.

Weihua Geng

J. Comput. Phys., 2013

A GPU-accelerated direct-sum boundary integral Poisson-Boltzmann solver.

Weihua Geng, Ferosh Jacob

Comput. Phys. Commun., 2013

2011

Multiscale molecular dynamics using the matched interface and boundary method.

Weihua Geng, Guo-Wei Wei

J. Comput. Phys., 2011

MIBPB: A software package for electrostatic analysis.

Duan Chen, Zhan Chen, Changjun Chen, Weihua Geng, Guo-Wei Wei

J. Comput. Chem., 2011