Wu Xu

According to our database, Wu Xu authored at least 20 papers between 2009 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Development of a TSR-based method for understanding structural relationships of cofactors and local environments in photosystem I.

Lujun Luo, Tarikul I. Milon, Elijah K. Tandoh, Walter J. Galdamez, Andrei Y. Chistoserdov, Jianping Yu, Jan Kern, Yingchun Wang, Wu Xu

BMC Bioinform., December, 2025

Do Protein Transformers Have Biological Intelligence?

Fudong Lin, Wanrou Du, Jinchan Liu, Tarikul I. Milon, Shelby Meche, Wu Xu, Xiaoqi Qin, Xu Yuan

Proceedings of the Machine Learning and Knowledge Discovery in Databases. Applied Data Science Track, 2025

2024

Integrating Secondary Structures Information into Triangular Spatial Relationships (TSR) for Advanced Protein Classification.

Poorya Khajouie, Titli Sarkar, Krishna Rauniyar, Li Chen, Wu Xu, Vijay Raghavan

CoRR, 2024

Development of a novel representation of drug 3D structures and enhancement of the TSR-based method for probing drug and target interactions.

Tarikul I. Milon, Yuhong Wang, Ryan L. Fontenot, Poorya Khajouie, Francois Villinger, Vijay Raghavan, Wu Xu

Comput. Biol. Chem., 2024

2023

Research on system of ultra-flat carrying robot based on improved PSO algorithm.

Jinghao Zhu, Jun Wu, Zhongxiang Chen, Libo Cao, Minghai Yang, Wu Xu

Frontiers Neurorobotics, August, 2023

Introducing mirror-image discrimination capability to the TSR-based method for capturing stereo geometry and understanding hierarchical structure relationships of protein receptor family.

Titli Sarkar, Yuwu Chen, Yu Wang, Yixin Chen, Feng Chen, Camille R. Reaux, Laura E. Moore, Vijay Raghavan, Wu Xu

Comput. Biol. Chem., April, 2023

2021

Exploring the effectiveness of the TSR-based protein 3-D structural comparison method for protein clustering, and structural motif identification and discovery of protein kinases, hydrolases, and SARS-CoV-2's protein via the application of amino acid grouping.

Titli Sarkar, Vijay V. Raghavan, Feng Chen, Andrew Riley, Sophia Zhou, Wu Xu

Comput. Biol. Chem., 2021

2017

Efficient Bottleneck Detection in Stream Process System Using Fuzzy Logic Model.

Yanlong Zhai, Wu Xu

Proceedings of the 25th Euromicro International Conference on Parallel, 2017

Descriptor based protein structure representation using triangular spatial relationships in 3-D.

Sumi Singh, Wu Xu, Vijay V. Raghavan

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Overcoming Policy and Operational Challenges for Health Data Exchange Using a Validation Service for Patient to Provider Relationships.

Sidney N. Thornton, Shan He, Darren K. Mann, Iona M. Thraen, Matt S. Hoffman, Wu Xu

Proceedings of the AMIA 2017, 2017

2016

Experimental and molecular dynamics studies showed that CBP KIX mutation affects the stability of CBP: c-Myb complex.

Anne Odoux, Darren Jindal, Tamara C. Tamas, Benjamin W. H. Lim, Drake Pollard, Wu Xu

Comput. Biol. Chem., 2016

Convening Utah's Healthcare Interests -A Statewide Care Coordination Infrastructure.

Sidney N. Thornton, Shan He, Iona M. Thraen, Matt Hoffman, Darren K. Mann, Wu Xu

Proceedings of the AMIA 2016, 2016

2015

Developing a Collaborative Evaluation Framework for Utah's APCD.

Jennifer H. Garvin, Kristina Doing-Harris, Jonathan H. Cardwell, Charles Hawley, Wu Xu

Proceedings of the AMIA 2015, 2015

2014

All-atomic molecular dynamic studies of human CDK8: Insight into the A-loop, point mutations and binding with its partner CycC.

Wu Xu, Benjamin Amire-Brahimi, Xiao-Jun Xie, Liying Huang, Jun-Yuan Ji

Comput. Biol. Chem., 2014

Adopting a Collaborative Program Evaluation Model to Aid Administration and Evaluation of a Large-Scale Public Health IT Grant.

Jonathan H. Cardwell, Kristina Doing-Harris, Megha Kalsy, Wu Xu, Jennifer H. Garvin

Proceedings of the AMIA 2014, 2014

2012

Problem-based practice, research and learning in public health informatics.

Michael Coletta, Herman D. Tolentino, P. Gibson, Sridhar Papagari Sangareddy, Wu Xu

Proceedings of the AMIA 2012, 2012

2011

Stochastic Modeling File Population in P2P Network.

Fang Qun, Wu Xu, Xu Yong

Proceedings of the Seventh International Conference on Computational Intelligence and Security, 2011

2010

The diversity and molecular modelling analysis of B₁₂-dependent and B₁₂-independent glycerol dehydratases.

Yuemin Liu, August A. Gallo, Rakesh K. Bajpai, Andrei Y. Chistoserdov, Andrew T. Nelson, Leah N. Segura, Wu Xu

Int. J. Bioinform. Res. Appl., 2010

2009

A case for using grid architecture for state public health informatics: the Utah perspective.

Catherine J. Staes, Wu Xu, Samuel D. LeFevre, Ronald C. Price, Scott P. Narus, Adi V. Gundlapalli, Robert T. Rolfs, Barry Nangle, Matthew H. Samore, Julio C. Facelli

BMC Medical Informatics Decis. Mak., 2009

Mission-Driven Priorities: Public Health in Health Information Exchange.

Barry Nangle, Wu Xu, David N. Sundwall

Proceedings of the AMIA 2009, 2009