Yana Safonova

According to our database, Yana Safonova authored at least 7 papers between 2014 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

PatchWorkPlot: simultaneous visualization of local alignments across multiple sequences.

Mariia Pospelova, Yana Safonova

Bioinform., 2025

2021

Trace Reconstruction Problems in Computational Biology.

Vinnu Bhardwaj, Pavel A. Pevzner, Cyrus Rashtchian, Yana Safonova

IEEE Trans. Inf. Theory, 2021

2020

Automated analysis of immunosequencing datasets reveals novel immunoglobulin D genes across diverse species.

Vinnu Bhardwaj, Massimo Franceschetti, Ramesh Rao, Pavel A. Pevzner, Yana Safonova

PLoS Comput. Biol., 2020

2017

Reconstructing Antibody Repertoires from Error-Prone Immunosequencing Datasets.

Alexander Shlemov, Sergey Bankevich, Andrey V. Bzikadze, Yana Safonova, Pavel A. Pevzner

Proceedings of the Research in Computational Molecular Biology, 2017

2015

IgSimulator: a versatile immunosequencing simulator.

Yana Safonova, Alla L. Lapidus, Jennie Lill

Bioinform., 2015

IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis.

Yana Safonova, Stefano Bonissone, Eugene Kurpilyansky, Ekaterina Starostina, Alla L. Lapidus, Jeremy Stinson, Laura DePalatis, Wendy Sandoval, Jennie Lill, Pavel A. Pevzner

Bioinform., 2015

2014

dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes.

Yana Safonova, Anton Bankevich, Pavel A. Pevzner

Proceedings of the Research in Computational Molecular Biology, 2014