Yuanyuan Chen

According to our database, Yuanyuan Chen authored at least 13 papers between 2014 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

MMG4: Recognition of G4-Forming Sequences Based on Markov Model.

Boyuan Yu, Hao Zhang, Cong Pian, Yuanyuan Chen

J. Comput. Biol., 2024

2023

NcPath: a novel platform for visualization and enrichment analysis of human non-coding RNA and KEGG signaling pathways.

Zutan Li, Yuan Zhang, Jingya Fang, Zhihui Xu, Hao Zhang, Minfang Mao, Yuanyuan Chen, Liangyun Zhang, Cong Pian

Bioinform., January, 2023

Improving the performance of single-cell RNA-seq data mining based on relative expression orderings.

Yuanyuan Chen, Hao Zhang, Xiao Sun

Briefings Bioinform., January, 2023

2022

Predicting the structure of unexplored novel fentanyl analogues by deep learning model.

Yuan Zhang, Qiaoyan Jiang, Ling Li, Zutan Li, Zhihui Xu, Yuanyuan Chen, Yang Sun, Cheng Liu, Zhengsheng Mao, Feng Chen, Hualan Li, Yue Cao, Cong Pian

Briefings Bioinform., 2022

MiRLoc: predicting miRNA subcellular localization by incorporating miRNA-mRNA interactions and mRNA subcellular localization.

Mingmin Xu, Yuanyuan Chen, Zhihui Xu, Liangyun Zhang, Hangjin Jiang, Cong Pian

Briefings Bioinform., 2022

Adapt-Kcr: a novel deep learning framework for accurate prediction of lysine crotonylation sites based on learning embedding features and attention architecture.

Zutan Li, Jingya Fang, Shining Wang, Liangyun Zhang, Yuanyuan Chen, Cong Pian

Briefings Bioinform., 2022

2021

Deep6mA: A deep learning framework for exploring similar patterns in DNA N6-methyladenine sites across different species.

Zutan Li, Hangjin Jiang, Lingpeng Kong, Yuanyuan Chen, Kun Lang, Xiaodan Fan, Liangyun Zhang, Cong Pian

PLoS Comput. Biol., 2021

Mining influential genes based on deep learning.

Lingpeng Kong, Yuanyuan Chen, Fengjiao Xu, Mingmin Xu, Zutan Li, Jingya Fang, Liangyun Zhang, Cong Pian

BMC Bioinform., 2021

Sample-specific perturbation of gene interactions identifies breast cancer subtypes.

Yuanyuan Chen, Yu Gu, Zixi Hu, Xiao Sun

Briefings Bioinform., 2021

2020

SOMM4mC: a second-order Markov model for DNA N4-methylcytosine site prediction in six species.

Jiali Yang, Kun Lang, Guang-Le Zhang, Xiaodan Fan, Yuanyuan Chen, Cong Pian

Bioinform., 2020

2017

V-ELMpiRNAPred: Identification of human piRNAs by the voting-based extreme learning machine (V-ELM) with a new hybrid feature.

Cong Pian, Yuanyuan Chen, Jin Zhang, Zhi Chen, Guang-Le Zhang, Qiang Li, Tao Yang, Liang-Yun Zhang

J. Bioinform. Comput. Biol., 2017

2016

OP-Triplet-ELM: Identification of real and pseudo microRNA precursors using extreme learning machine with optimal features.

Cong Pian, Jin Zhang, Yuanyuan Chen, Zhi Chen, Qin Li, Qiang Li, Liang-Yun Zhang

J. Bioinform. Comput. Biol., 2016

2014

Promoter recognition based on the maximum entropy hidden Markov model.

Xiao-yu Zhao, Jin Zhang, Yuanyuan Chen, Qiang Li, Tao Yang, Cong Pian, Liang-Yun Zhang

Comput. Biol. Medicine, 2014