Alexander Ian Smith

Orcid: 0000-0002-4143-2892

According to our database1, Alexander Ian Smith authored at least 13 papers between 2015 and 2021.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

On csauthors.net:

Bibliography

2021
A Deep Learning-Based Method for Identification of Bacteriophage-Host Interaction.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021

2020
Procleave: Predicting Protease-specific Substrate Cleavage Sites by Combining Sequence and Structural Information.
Genom. Proteom. Bioinform., 2020

PeNGaRoo, a combined gradient boosting and ensemble learning framework for predicting non-classical secreted proteins.
Bioinform., 2020

DeepCleave: a deep learning predictor for caspase and matrix metalloprotease substrates and cleavage sites.
Bioinform., 2020

A comprehensive review and performance evaluation of bioinformatics tools for HLA class I peptide-binding prediction.
Briefings Bioinform., 2020

PRISMOID: a comprehensive 3D structure database for post-translational modifications and mutations with functional impact.
Briefings Bioinform., 2020

Comprehensive review and assessment of computational methods for predicting RNA post-transcriptional modification sites from RNA sequences.
Briefings Bioinform., 2020

iLearn : an integrated platform and meta-learner for feature engineering, machine-learning analysis and modeling of DNA, RNA and protein sequence data.
Briefings Bioinform., 2020

2019
Twenty years of bioinformatics research for protease-specific substrate and cleavage site prediction: a comprehensive revisit and benchmarking of existing methods.
Briefings Bioinform., 2019

Large-scale comparative assessment of computational predictors for lysine post-translational modification sites.
Briefings Bioinform., 2019

2018
Quokka: a comprehensive tool for rapid and accurate prediction of kinase family-specific phosphorylation sites in the human proteome.
Bioinform., 2018

iFeature: a Python package and web server for features extraction and selection from protein and peptide sequences.
Bioinform., 2018

2015
On the design of finite-state type systems.
PhD thesis, 2015


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