Alexandra Badea

According to our database, Alexandra Badea authored at least 26 papers between 2005 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

Skull stripping with purely synthetic data.

Jong Sung Park, Juhyung Ha, Siddhesh P. Thakur, Alexandra Badea, Spyridon Bakas, Eleftherios Garyfallidis

CoRR, May, 2025

2024

Discovering the signal subgraph: An iterative screening approach on graphs.

Cencheng Shen, Shangsi Wang, Alexandra Badea, Carey E. Priebe, Joshua T. Vogelstein

Pattern Recognit. Lett., 2024

2023

Learning sources of variability from high-dimensional observational studies.

Eric W. Bridgeford, Jaewon Chung, Brian Gilbert, Sambit Panda, Adam Li, Cencheng Shen, Alexandra Badea, Brian Caffo, Joshua T. Vogelstein

CoRR, 2023

2022

Anatomical and functional cardiac PCCT imaging pipeline for characterization of Apolipoprotein E mouse models.

Alex J. Allphin, Darin P. Clark, Alexandra Badea, Cristian T. Badea

Proceedings of the Medical Imaging 2022: Biomedical Applications in Molecular, 2022

2020

MRI-based radiomics of sarcomas in the preclinical arm of a co-clinical trial.

Matthew D. Holbrook, Stephanie J. Blocker, Yvonne M. Mowery, Alexandra Badea, Yi Qi, David G. Kirsch, Cristian T. Badea

Proceedings of the Medical Imaging 2020: Biomedical Applications in Molecular, 2020

2019

Connectome Smoothing via Low-Rank Approximations.

Runze Tang, Michael D. Ketcha, Alexandra Badea, Evan D. Calabrese, Daniel S. Margulies, Joshua T. Vogelstein, Carey E. Priebe, Daniel L. Sussman

IEEE Trans. Medical Imaging, 2019

Small Animal Multivariate Brain Analysis (SAMBA) - a High Throughput Pipeline with a Validation Framework.

Robert J. Anderson, James J. Cook, Natalie A. Delpratt, John C. Nouls, Bin Gu, James O. McNamara, Brian B. Avants, G. Allan Johnson, Alexandra Badea

Neuroinformatics, 2019

Identifying Vulnerable Brain Networks in Mouse Models of Genetic Risk Factors for Late Onset Alzheimer's Disease.

Alexandra Badea, Wenlin Wu, Jordan Shuff, Michele Wang, Robert J. Anderson, Yi Qi, G. Allan Johnson, Joan G. Wilson, Serge Koudoro, Eleftherios Garyfallidis, Carol A. Colton, David B. Dunson

Frontiers Neuroinformatics, 2019

2017

An HPC Pipeline with Validation Framework for Small Animal Multivariate Brain Analysis (SAMBA).

Robert J. Anderson, James J. Cook, Natalie A. Delpratt, John C. Nouls, Bin Gu, James O. McNamara, Brian B. Avants, G. Allan Johnson, Alexandra Badea

CoRR, 2017

2016

The fornix provides multiple biomarkers to characterize circuit disruption in a mouse model of Alzheimer's disease.

Alexandra Badea, Lauren Kane, Robert J. Anderson, Yi Qi, Mark Foster, Gary P. Cofer, Neil Medvitz, Anne F. Buckley, Andreas K. Badea, William C. Wetsel, Carol A. Colton

NeuroImage, 2016

Image-processing pipelines: applications in magnetic resonance histology.

G. Allan Johnson, Robert J. Anderson, James J. Cook, Christopher Long, Alexandra Badea

Proceedings of the Medical Imaging 2016: Image Processing, 2016

2015

A diffusion tensor MRI atlas of the postmortem rhesus macaque brain.

Evan Calabrese, Alexandra Badea, Christopher L. Coe, Gabriele R. Lubach, Yundi Shi, Martin Andreas Styner, G. Allan Johnson

NeuroImage, 2015

2013

A quantitative magnetic resonance histology atlas of postnatal rat brain development with regional estimates of growth and variability.

Evan Calabrese, Alexandra Badea, Charles Watson, G. Allan Johnson

NeuroImage, 2013

Constructing a 4D murine cardiac micro-CT atlas for automated segmentation and phenotyping applications.

Darin P. Clark, Alexandra Badea, G. Allan Johnson, Cristian T. Badea

Proceedings of the Medical Imaging 2013: Image Processing, 2013

2012

A prior feature SVM-MRF based method for mouse brain segmentation.

Teresa Wu, Min Hyeok Bae, Min Zhang, Rong Pan, Alexandra Badea

NeuroImage, 2012

A multidimensional magnetic resonance histology atlas of the Wistar rat brain.

G. Allan Johnson, Evan Calabrese, Alexandra Badea, George Paxinos, Charles Watson

NeuroImage, 2012

Quantitative mouse brain phenotyping based on single and multispectral MR protocols.

Alexandra Badea, Sally L. Gewalt, Brian B. Avants, James J. Cook, G. Allan Johnson

NeuroImage, 2012

2010

Waxholm Space: An image-based reference for coordinating mouse brain research.

G. Allan Johnson, Alexandra Badea, Jeffrey Brandenburg, Gary P. Cofer, Boma Fubara, Song Liu, Jonathan Nissanov

NeuroImage, 2010

Remote sites of structural atrophy predict later amyloid formation in a mouse model of Alzheimer's disease.

Alexandra Badea, G. Allan Johnson, Joanna L. Jankowsky

NeuroImage, 2010

2009

Automated segmentation of mouse brain images using extended MRF.

Min Hyeok Bae, Rong Pan, Teresa Wu, Alexandra Badea

NeuroImage, 2009

Genetic dissection of the mouse brain using high-field magnetic resonance microscopy.

Alexandra Badea, G. Allan Johnson, Robert W. Williams

NeuroImage, 2009

2008

Automated segmentation of the actively stained mouse brain using multi-spectral MR microscopy.

Anjum A. Sharief, Alexandra Badea, Anders M. Dale, G. Allan Johnson

NeuroImage, 2008

2007

High-throughput morphologic phenotyping of the mouse brain with magnetic resonance histology.

G. Allan Johnson, Anjum Ali-Sharief, Alexandra Badea, Jeffrey Brandenburg, Gary P. Cofer, Boma Fubara, Sally L. Gewalt, Laurence W. Hedlund, Lucy Upchurch

NeuroImage, 2007

Neuroanatomical phenotypes in the Reeler mouse.

Alexandra Badea, Peter Nicholls, G. Allan Johnson, William C. Wetsel

NeuroImage, 2007

Morphometric analysis of the C57BL/6J mouse brain.

Alexandra Badea, A. A. Ali-Sharief, G. Allan Johnson

NeuroImage, 2007

2005

Automated segmentation of neuroanatomical structures in multispectral MR microscopy of the mouse brain.

Anjum A. Sharief, Anders M. Dale, Alexandra Badea, G. Allan Johnson

NeuroImage, 2005