Brian B. Avants

According to our database1, Brian B. Avants authored at least 91 papers between 2000 and 2019.

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Bibliography

2019
Small Animal Multivariate Brain Analysis (SAMBA) - a High Throughput Pipeline with a Validation Framework.
Neuroinformatics, 2019

2017
Multi-template analysis of human perirhinal cortex in brain MRI: Explicitly accounting for anatomical variability.
NeuroImage, 2017

2015
The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).
IEEE Trans. Med. Imaging, 2015

Optimal Symmetric Multimodal Templates and Concatenated Random Forests for Supervised Brain Tumor Segmentation (Simplified) with ANTsR.
Neuroinformatics, 2015

Decomposing cerebral blood flow MRI into functional and structural components: A non-local approach based on prediction.
NeuroImage, 2015

Evaluation of automatic neonatal brain segmentation algorithms: The NeoBrainS12 challenge.
Medical Image Analysis, 2015

Neuroinformatics and the The Insight ToolKit.
Front. Neuroinform., 2015

2014
Large-scale evaluation of ANTs and FreeSurfer cortical thickness measurements.
NeuroImage, 2014

Subject-specific functional parcellation via Prior Based Eigenanatomy.
NeuroImage, 2014

Relating brain anatomy and cognitive ability using a multivariate multimodal framework.
NeuroImage, 2014

Sparse canonical correlation analysis relates network-level atrophy to multivariate cognitive measures in a neurodegenerative population.
NeuroImage, 2014

Histology-derived volumetric annotation of the human hippocampal subfields in postmortem MRI.
NeuroImage, 2014

The Insight ToolKit image registration framework.
Front. Neuroinform., 2014

Automatic Clustering and Thickness Measurement of Anatomical Variants of the Human Perirhinal Cortex.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Single-Subject Structural Networks with Closed-Form Rotation Invariant Matching Improve Power in Developmental Studies of the Cortex.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Cortical parcellation for neonatal brains.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

2013
Explicit B-spline regularization in diffeomorphic image registration.
Front. Neuroinform., 2013

Anatomically-Constrained PCA for Image Parcellation.
Proceedings of the International Workshop on Pattern Recognition in Neuroimaging, 2013

Fusing Functional Signals by Sparse Canonical Correlation Analysis Improves Network Reproducibility.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Using Region Trajectories to Construct an Accurate and Efficient Polyaffine Transform Model.
Proceedings of the Information Processing in Medical Imaging, 2013

Predicting Cognitive Data from Medical Images Using Sparse Linear Regression.
Proceedings of the Information Processing in Medical Imaging, 2013

2012
Measuring longitudinal change in the hippocampal formation from in vivo high-resolution T2-weighted MRI.
NeuroImage, 2012

Quantitative mouse brain phenotyping based on single and multispectral MR protocols.
NeuroImage, 2012

Learning from open source software projects to improve scientific review.
Front. Comput. Neurosci., 2012

Diffeomorphic Directly Manipulated Free-Form Deformation Image Registration via Vector Field Flows.
Proceedings of the Biomedical Image Registration - 5th International Workshop, 2012

A Unified Image Registration Framework for ITK.
Proceedings of the Biomedical Image Registration - 5th International Workshop, 2012

Eigenanatomy Improves Detection Power for Longitudinal Cortical Change.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Agreement between the white matter connectivity based on the tensor-based morphometry and the volumetric white matter parcellations based on diffusion tensor imaging.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Partial sparse canonical correlation analysis (PSCCA) for population studies in medical imaging.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Reconstruction of the human hippocampus in 3D from histology and high-resolution ex-vivo MRI.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

From label fusion to correspondence fusion: A new approach to unbiased groupwise registration.
Proceedings of the 2012 IEEE Conference on Computer Vision and Pattern Recognition, 2012

2011
Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge.
IEEE Trans. Med. Imaging, 2011

Topological Well-Composedness and Glamorous Glue: A Digital Gluing Algorithm for Topologically Constrained Front Propagation.
IEEE Trans. Image Processing, 2011

An Open Source Multivariate Framework for n-Tissue Segmentation with Evaluation on Public Data.
Neuroinformatics, 2011

A learning-based wrapper method to correct systematic errors in automatic image segmentation: Consistently improved performance in hippocampus, cortex and brain segmentation.
NeuroImage, 2011

A reproducible evaluation of ANTs similarity metric performance in brain image registration.
NeuroImage, 2011

Structural connectivity via the tensor-based morphometry.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

2010
N4ITK: Improved N3 Bias Correction.
IEEE Trans. Med. Imaging, 2010

Nearly automatic segmentation of hippocampal subfields in in vivo focal T2-weighted MRI.
NeuroImage, 2010

Bias in estimation of hippocampal atrophy using deformation-based morphometry arises from asymmetric global normalization: An illustration in ADNI 3 T MRI data.
NeuroImage, 2010

Early parental care is important for hippocampal maturation: Evidence from brain morphology in humans.
NeuroImage, 2010

Evaluation of volume-based and surface-based brain image registration methods.
NeuroImage, 2010

The optimal template effect in hippocampus studies of diseased populations.
NeuroImage, 2010

Dementia induces correlated reductions in white matter integrity and cortical thickness: A multivariate neuroimaging study with sparse canonical correlation analysis.
NeuroImage, 2010

Standing on the Shoulders of Giants: Improving Medical Image Segmentation via Bias Correction.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010

Sparse Unbiased Analysis of Anatomical Variance in Longitudinal Imaging.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010

2009
Directly Manipulated Free-Form Deformation Image Registration.
IEEE Trans. Image Processing, 2009

A high-resolution computational atlas of the human hippocampus from postmortem magnetic resonance imaging at 9.4 T.
NeuroImage, 2009

Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration.
NeuroImage, 2009

Registration based cortical thickness measurement.
NeuroImage, 2009

2008
Structural consequences of diffuse traumatic brain injury: A large deformation tensor-based morphometry study.
NeuroImage, 2008

Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain.
Medical Image Analysis, 2008

Shape-Based Alignment of Hippocampal Subfields: Evaluation in Postmortem MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Cardiac Medial Modeling and Time-Course Heart Wall Thickness Analysis.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Building an atlas of hippocampal subfields using postmortem MRI.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Branching medial models for cardiac shape representation.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Spatial correspondence based asymmetry analysis in FMRI.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Multivariate analysis of thalamo-cortical connectivity loss in TBI.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2008

2007
High-Dimensional Spatial Normalization of Diffusion Tensor Images Improves the Detection of White Matter Differences: An Example Study Using Amyotrophic Lateral Sclerosis.
IEEE Trans. Med. Imaging, 2007

Neuroinformatics for Genome-Wide 3-D Gene Expression Mapping in the Mouse Brain.
IEEE/ACM Trans. Comput. Biology Bioinform., 2007

Multivariate examination of brain abnormality using both structural and functional MRI.
NeuroImage, 2007

Multivariate Normalization with Symmetric Diffeomorphisms for Multivariate Studies.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Spatiotemporal Normalization for Longitudinal Analysis of Gray Matter Atrophy in Frontotemporal Dementia.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Symmetric Shape Averaging in the Diffeomorphic Space.
Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007

Improved FFD B-Spline Image Registration.
Proceedings of the IEEE 11th International Conference on Computer Vision, 2007

Multi-start Method with Prior Learning for Image Registration.
Proceedings of the IEEE 11th International Conference on Computer Vision, 2007

Measuring Cortical Thickness Using An Image Domain Local Surface Model And Topology Preserving Segmentation.
Proceedings of the IEEE 11th International Conference on Computer Vision, 2007

2006
Lagrangian frame diffeomorphic image registration: Morphometric comparison of human and chimpanzee cortex.
Medical Image Analysis, 2006

3D Mouse Brain Reconstruction from Histology Using a Coarse-to-Fine Approach.
Proceedings of the Biomedical Image Registration, Third International Workshop, 2006

A Generalization of Free-Form Deformation Image Registration Within the ITK Finite Element Framework.
Proceedings of the Biomedical Image Registration, Third International Workshop, 2006

Symmetric Diffeomorphic Image Registration: Evaluating Automated Labeling of Elderly and Neurodegenerative Cortex and Frontal Lobe.
Proceedings of the Biomedical Image Registration, Third International Workshop, 2006

Integrated Graph Cuts for Brain MRI Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006

Geodesic Image Normalization and Temporal Parameterization in the Space of Diffeomorphisms.
Proceedings of the Medical Imaging and Augmented Reality, 2006

Adaptive graph cuts with tissue priors for brain MRI segmentation.
Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2006

Analyzing Effects of Intra-Uterine Cocaine Exposure on Adolescent Brain Structure with Symmetric Diffeomorphisms.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2006

Anatomy-Based Visualizations of Diffusion Tensor Images of Brain White Matter.
Proceedings of the Visualization and Processing of Tensor Fields, 2006

2005
Geodesic Image Interpolation: Parameterizing and Interpolating Spatiotemporal Images.
Proceedings of the Variational, 2005

Towards a Dynamic Model of Pulmonary Parenchymal Deformation: Evaluation of Methods for Temporal Reparameterization of Lung Data.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

An Automated Approach to Connectivity-Based Partitioning of Brain Structures.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

2004
A Dynamic Model of Average Lung Deformation Using Capacity-Based Reparameterization and Shape Averaging of Lung MR Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Shape Averaging with Diffeomorphic Flows for Atlas Creation.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

Symmetric Geodesic Shape Averaging and Shape Interpolation.
Proceedings of the Computer Vision and Mathematical Methods in Medical and Biomedical Image Analysis, 2004

2003
Formulation and Evaluation of Variational Curve Matching with Prior Constraints.
Proceedings of the Biomedical Image Registration, Second International Workshop, 2003

Continuous Curve Matching with Scale-Space Curvature and Extrema-Based Scale Selection.
Proceedings of the Scale Space Methods in Computer Vision, 4th International Conference, 2003

The Shape Operator for Differential Analysis of Images.
Proceedings of the Information Processing in Medical Imaging, 2003

2002
Soft parametric curve matching in scale-space.
Proceedings of the Medical Imaging 2002: Image Processing, 2002

Shape Characterization of the Corpus Callosum in Schizophrenia Using Template Deformation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Robust rotations between anatomical curves.
Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, 2002

Shape Characterization of the Corpus Callosum in Schizophrenia Using Template Deformation.
Proceedings of the AMIA 2002, 2002

2001
Computing Match Functions for Curves in R2 and R3 by Refining Polyline Approximations.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

2000
An Adaptive Minimal Path Generation Technique for Vessel Tracking in CTA/CE-MRA Volume Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000


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