Alexandre Rossi Paschoal

According to our database, Alexandre Rossi Paschoal authored at least 14 papers between 2012 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Inpactor2: a software based on deep learning to identify and classify LTR-retrotransposons in plant genomes.

Simon Orozco-Arias, Luis Humberto López-Murillo, Mariana S. Candamil-Cortes, Maradey Arias, Paula A. Jaimes, Alexandre Rossi Paschoal, Reinel Tabares-Soto, Gustavo A. Isaza, Romain Guyot

Briefings Bioinform., January, 2023

Make No Mistake! Why Do Tools Make Incorrect Long Non-coding RNA Classification?

Alisson G. Chiquitto, Lucas Otávio L. Silva, Liliane Santana Oliveira, Douglas Silva Domingues, Alexandre Rossi Paschoal

Proceedings of the Advances in Bioinformatics and Computational Biology, 2023

2022

Impact of sequencing technologies on long non-coding RNA computational identification.

Alisson G. Chiquitto, Lucas Otávio L. Silva, Liliane S. Oliveira, Douglas Silva Domingues, Alexandre Rossi Paschoal

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

TERL: classification of transposable elements by convolutional neural networks.

Murilo Horacio Pereira da Cruz, Douglas Silva Domingues, Priscila Tiemi Maeda Saito, Alexandre Rossi Paschoal, Pedro Henrique Bugatti

Briefings Bioinform., 2021

Feature extraction approaches for biological sequences: a comparative study of mathematical features.

Robson Bonidia, Lucas Dias H. Sampaio, Douglas Silva Domingues, Alexandre Rossi Paschoal, Fabrício Martins Lopes, André C. P. L. F. de Carvalho, Danilo Sipoli Sanches

Briefings Bioinform., 2021

2020

A Novel Decomposing Model With Evolutionary Algorithms for Feature Selection in Long Non-Coding RNAs.

Robson Parmezan Bonidia, Jaqueline Sayuri Machida, Tatianne da Costa Negri, Wonder Alexandre Luz Alves, André Y. Kashiwabara, Douglas Silva Domingues, André C. P. L. F. de Carvalho, Alexandre Rossi Paschoal, Danilo Sipoli Sanches

IEEE Access, 2020

Comparison tools for lncRNA identification: analysis among plants and humans.

Tatianne da Costa Negri, Alexandre Rossi Paschoal, Wonder Alexandre Luz Alves

Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2020

2019

mirtronDB: a mirtron knowledge base.

Bruno Henrique Ribeiro Da Fonseca, Douglas Silva Domingues, Alexandre Rossi Paschoal

Bioinform., 2019

Pattern recognition analysis on long noncoding RNAs: a tool for prediction in plants.

Tatianne da Costa Negri, Wonder Alexandre Luz Alves, Pedro Henrique Bugatti, Priscila Tiemi Maeda Saito, Douglas Silva Domingues, Alexandre Rossi Paschoal

Briefings Bioinform., 2019

Classification of Transposable Elements by Convolutional Neural Networks.

Murilo Horacio Pereira da Cruz, Priscila T. M. Saito, Alexandre Rossi Paschoal, Pedro Henrique Bugatti

Proceedings of the Artificial Intelligence and Soft Computing, 2019

Selecting the Most Relevant Features for the Identification of Long Non-Coding RNAs in Plants.

Robson Parmezan Bonidia, André Carlos Ponce de Leon Ferreira de Carvalho, Alexandre Rossi Paschoal, Danilo Sipoli Sanches

Proceedings of the 8th Brazilian Conference on Intelligent Systems, 2019

2018

PlaNC-TE: a comprehensive knowledgebase of non-coding RNAs and transposable elements in plants.

Daniel Longhi Fernandes Pedro, Alan Péricles Rodrigues Lorenzetti, Douglas Silva Domingues, Alexandre Rossi Paschoal

Database J. Biol. Databases Curation, 2018

ceRNAs in plants: computational approaches and associated challenges for target mimic research.

Alexandre Rossi Paschoal, Irma Lozada-Chávez, Douglas Silva Domingues, Peter F. Stadler

Briefings Bioinform., 2018

2012

Bioinformática aplicada em RNomics: estratégias computacionais para caracterização de RNAs não-codificadores.

Alexandre Rossi Paschoal

PhD thesis, 2012