Ali Rana Atilgan

According to our database, Ali Rana Atilgan authored at least 11 papers between 2008 and 2023.

Collaborative distances:

• Dijkstra number of six.
• Erdős number of five.

2023

Kinetic Barrier to Enzyme Inhibition Is Manipulated by Dynamical Local Interactions in <i>E. coli</i> DHFR.

Ebru Cetin, Tandac F. Guclu, Isik Kantarcioglu, Ilona K. Gaszek, Erdal Toprak, Ali Rana Atilgan, Burcu Dedeoglu, Canan Atilgan

J. Chem. Inf. Model., August, 2023

2022

DHFR Mutants Modulate Their Synchronized Dynamics with the Substrate by Shifting Hydrogen Bond Occupancies.

Ebru Çetin, Ali Rana Atilgan, Canan Atilgan

J. Chem. Inf. Model., 2022

2021

N-Terminus of the Third PDZ Domain of PSD-95 Orchestrates Allosteric Communication for Selective Ligand Binding.

Tandac F. Guclu, Nazli Kocatug, Ali Rana Atilgan, Canan Atilgan

J. Chem. Inf. Model., 2021

Could network structures generated with simple rules imposed on a cubic lattice reproduce the structural descriptors of globular proteins?

Osman Burak Okan, Deniz Turgut, Canan Atilgan, Ali Rana Atilgan, Rahmi Ozisik

J. Complex Networks, 2021

2018

MODE-TASK: large-scale protein motion tools.

Caroline J. Ross, Bilal Nizami, Michael Glenister, Olivier Sheik Amamuddy, Ali Rana Atilgan, Canan Atilgan, Özlem Tastan Bishop

Bioinform., 2018

2017

MD-TASK: a software suite for analyzing molecular dynamics trajectories.

David K. Brown, David L. Penkler, Olivier Sheik Amamuddy, Caroline J. Ross, Ali Rana Atilgan, Canan Atilgan, Özlem Tastan Bishop

Bioinform., 2017

2013

Designing Molecular Dynamics Simulations to Shift Populations of the Conformational States of Calmodulin.

Ayse Ozlem Aykut, Ali Rana Atilgan, Canan Atilgan

PLoS Comput. Biol., 2013

2010

Vulnerability of Networks Against Critical Link Failures

Serdar Çolak, Hilmi Lus, Ali Rana Atilgan

CoRR, 2010

Assortative Mixing in Close-Packed Spatial Networks

Deniz Turgut, Ali Rana Atilgan, Canan Atilgan

CoRR, 2010

2009

Perturbation-Response Scanning Reveals Ligand Entry-Exit Mechanisms of Ferric Binding Protein.

Canan Atilgan, Ali Rana Atilgan

PLoS Comput. Biol., 2009

2008

Collective Behavior of el Farol Attendees.

Canan Atilgan, Ali Rana Atilgan, Güven Demirel

Adv. Complex Syst., 2008