Allan dos Santos Costa

According to our database, Allan dos Santos Costa authored at least 6 papers between 2020 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2025

Efficient Molecular Conformer Generation with SO(3)-Averaged Flow Matching and Reflow.

Zhonglin Cao, Mario Geiger, Allan dos Santos Costa, Danny Reidenbach, Karsten Kreis, Tomas Geffner, Franco Pellegrini, Guoqing Zhou, Emine Küçükbenli

CoRR, July, 2025

RiboGen: RNA Sequence and Structure Co-Generation with Equivariant MultiFlow.

Dana Rubin, Allan dos Santos Costa, Manvitha Ponnapati, Joseph Jacobson

CoRR, March, 2025

2024

BioNeMo Framework: a modular, high-performance library for AI model development in drug discovery.

Peter St. John, Dejun Lin, Polina Binder, Malcolm Greaves, Vega Shah, John St. John, Adrian Lange, Patrick D. Hsu, Rajesh Illango, Arvind Ramanathan, Anima Anandkumar, David H. Brookes, Akosua Busia, Abhishaike Mahajan, Stephen Malina, Neha Prasad, Sam Sinai, Lindsay Edwards, Thomas Gaudelet, Cristian Regep, Martin Steinegger, Burkhard Rost, Alexander Brace, Kyle Hippe, Luca Naef, Keisuke Kamata, George Armstrong, Kevin Boyd, Zhonglin Cao, Han-Yi Chou, Simon Chu, Allan dos Santos Costa, Sajad Darabi, Eric Dawson, Kieran Didi, Cong Fu, Mario Geiger, Michelle Gill, Darren Hsu, Gagan Kaushik, Maria Korshunova, Steven Kothen-Hill, Youhan Lee, Meng Liu, Micha Livne, Zachary McClure, Jonathan Mitchell, Alireza Moradzadeh, Ohad Mosafi, Youssef Nashed, Saee Paliwal, Yuxing Peng, Sara Rabhi, Farhad Ramezanghorbani, Danny Reidenbach, Camir Ricketts, Brian Roland, Kushal Shah, Tyler Shimko, Hassan Sirelkhatim, Savitha Srinivasan, Abraham C. Stern, Dorota Toczydlowska, Srimukh Prasad Veccham, Niccolò Alberto Elia Venanzi, Anton Vorontsov, Jared Wilber, Isabel Wilkinson, Wei Jing Wong, Eva Xue, Cory Ye, Xin Yu, Yang Zhang, Guoqing Zhou, Becca Zandstein, Christian Dallago, Bruno Trentini, Emine Küçükbenli, Timur Rvachov, Eddie Calleja, Johnny Israeli, Harry Clifford, Risto Haukioja, Nicholas Haemel, Kyle Tretina, Neha Tadimeti, Anthony B. Costa

CoRR, 2024

EquiJump: Protein Dynamics Simulation via SO(3)-Equivariant Stochastic Interpolants.

Allan dos Santos Costa, Ilan Mitnikov, Franco Pellegrini, Ameya Daigavane, Mario Geiger, Zhonglin Cao, Karsten Kreis, Tess E. Smidt, Emine Küçükbenli, Joseph Jacobson

CoRR, 2024

2023

Ophiuchus: Scalable Modeling of Protein Structures through Hierarchical Coarse-graining SO(3)-Equivariant Autoencoders.

Allan dos Santos Costa, Ilan Mitnikov, Mario Geiger, Manvitha Ponnapati, Tess E. Smidt, Joseph Jacobson

CoRR, 2023

2020

Interpretable Neuroevolutionary Models for Learning Non-Differentiable Functions and Programs.

Allan dos Santos Costa, Rumen Dangovski, Samuel Kim, Pawan Goyal, Marin Soljacic, Joseph Jacobson

CoRR, 2020