Almut Heinken

According to our database, Almut Heinken authored at least 5 papers between 2019 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

A structured evaluation of genome-scale constraint-based modeling tools for microbial consortia.

William T. Scott Jr., Sara Benito-Vaquerizo, Johannes Zimmermann, Djordje Bajic, Almut Heinken, María Suárez-Diez, Peter J. Schaap

PLoS Comput. Biol., 2023

2022

Microbiome Modelling Toolbox 2.0: efficient, tractable modelling of microbiome communities.

Almut Heinken, Ines Thiele

Bioinform., 2022

2021

DEMETER: efficient simultaneous curation of genome-scale reconstructions guided by experimental data and refined gene annotations.

Almut Heinken, Stefanía Magnúsdóttir, Ronan M. T. Fleming, Ines Thiele

Bioinform., 2021

2019

The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease.

Alberto Noronha, Jennifer Modamio, Yohan Jarosz, Elisabeth Guerard, Nicolas Sompairac, German A. Preciat Gonzalez, Anna Dröfn Daníelsdóttir, Max Krecke, Diane Merten, Hulda S. Haraldsdóttir, Almut Heinken, Laurent Heirendt, Stefanía Magnúsdóttir, Dmitry A. Ravcheev, Swagatika Sahoo, Piotr Gawron, Lucia Friscioni, Beatriz Garcia Santa Cruz, Mabel Prendergast, Alberto Puente, Mariana Rodrigues, Akansha Roy, Mouss Rouquaya, Luca Wiltgen, Alise Zagare, Elisabeth John, Maren Krueger, Inna Kuperstein, Andrei Yu. Zinovyev, Reinhard Schneider, Ronan M. T. Fleming, Ines Thiele

Nucleic Acids Res., 2019

The Microbiome Modeling Toolbox: from microbial interactions to personalized microbial communities.

Federico Baldini, Almut Heinken, Laurent Heirendt, Stefanía Magnúsdóttir, Ronan M. T. Fleming, Ines Thiele

Bioinform., 2019