Amir Ben-Dor

According to our database, Amir Ben-Dor authored at least 33 papers between 1993 and 2024.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of two.

2024

Deep-Learning Based Virtual Stain Multiplexing Immunohistochemistry Slides - a Pilot Study.

Oded Ben-David, Elad Arbel, Daniela Rabkin, Itay Remer, Amir Ben-Dor, Sarit Aviel-Ronen, Frederik Aidt, Tine Hagedorn-Olsen, Lars Jacobsen, Kristopher Kersch, Anya Tsalenko

Proceedings of the MICCAI Workshop on Computational Pathology, 2024

2020

A Multi-Organ Nucleus Segmentation Challenge.

Neeraj Kumar, Ruchika Verma, Deepak Anand, Yanning Zhou, Omer Fahri Onder, Efstratios Tsougenis, Hao Chen, Pheng-Ann Heng, Jiahui Li, Zhiqiang Hu, Yunzhi Wang, Navid Alemi Koohbanani, Mostafa Jahanifar, Neda Zamani Tajeddin, Ali Gooya, Nasir M. Rajpoot, Xuhua Ren, Sihang Zhou, Qian Wang, Dinggang Shen, Cheng-Kun Yang, Chi-Hung Weng, Wei-Hsiang Yu, Chao-Yuan Yeh, Shuang Yang, Shuoyu Xu, Pak-Hei Yeung, Peng Sun, Amirreza Mahbod, Gerald Schaefer, Isabella Ellinger, Rupert Ecker, Örjan Smedby, Chunliang Wang, Benjamin Chidester, That-Vinh Ton, Minh-Triet Tran, Jian Ma, Minh N. Do, Simon Graham, Quoc Dang Vu, Jin Tae Kwak, Akshaykumar Gunda, Raviteja Chunduri, Corey Hu, Xiaoyang Zhou, Dariush Lotfi, Reza Safdari, Antanas Kascenas, Alison O'Neil, Dennis Eschweiler, Johannes Stegmaier, Yanping Cui, Baocai Yin, Kailin Chen, Xinmei Tian, Philipp Grüning, Erhardt Barth, Elad Arbel, Itay Remer, Amir Ben-Dor, Ekaterina Sirazitdinova, Matthias Kohl, Stefan Braunewell, Yuexiang Li, Xinpeng Xie, Linlin Shen, Jun Ma, Krishanu Das Baksi, Mohammad Azam Khan, Jaegul Choo, Adrián Colomer, Valery Naranjo, Linmin Pei, Khan M. Iftekharuddin, Kaushiki Roy, Debotosh Bhattacharjee, Aníbal Pedraza, Maria Gloria Bueno, Sabarinathan Devanathan, Saravanan Radhakrishnan, Praveen Koduganty, Zihan Wu, Guanyu Cai, Xiaojie Liu, Yuqin Wang, Amit Sethi

IEEE Trans. Medical Imaging, 2020

2017

Optimizing Analytical Depth and Cost Efficiency of IEF-LC/MS Proteomics.

Ilona Kifer, Rui Mamede Branca, Amir Ben-Dor, Linhui Zhai, Ping Xu, Janne Lehtiö, Zohar Yakhini

IEEE ACM Trans. Comput. Biol. Bioinform., 2017

2014

Optimizing analytical depth and cost efficiency of IEF-LC/MS proteomics.

Ilona Kifer, Amir Ben-Dor, Zohar Yakhini, Rui Mamede Branca, Janne Lehtiö, Ping Xu

Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

2007

Framework for Identifying Common Aberrations in DNA Copy Number Data.

Amir Ben-Dor, Doron Lipson, Anya Tsalenko, Mark Reimers, Lars O. Baumbusch, Michael T. Barrett, John N. Weinstein, Anne-Lise Børresen-Dale, Zohar Yakhini

Proceedings of the Research in Computational Molecular Biology, 2007

2005

Multiplexing Schemes for Generic SNP Genotyping Assays.

Roded Sharan, Jens Gramm, Zohar Yakhini, Amir Ben-Dor

J. Comput. Biol., 2005

Exploratory visualization of array-based comparative genomic hybridization.

Robert Kincaid, Amir Ben-Dor, Zohar Yakhini

Inf. Vis., 2005

Efficient Calculation of Interval Scores for DNA Copy Number Data Analysis.

Doron Lipson, Yonatan Aumann, Amir Ben-Dor, Nathan Linial, Zohar Yakhini

Proceedings of the Research in Computational Molecular Biology, 2005

Analysis of SNP-Expression Association Matrices.

Anya Tsalenko, Roded Sharan, Hege Edvardsen, Vessela N. Kristensen, Anne-Lise Børresen-Dale, Amir Ben-Dor, Zohar Yakhini

Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, 2005

2004

Towards Optimally Multiplexed Applications of Universal Arrays.

Amir Ben-Dor, Tzvika Hartman, Richard M. Karp, Benno Schwikowski, Roded Sharan, Zohar Yakhini

J. Comput. Biol., 2004

Joint Analysis of DNA Copy Numbers and Gene Expression Levels.

Doron Lipson, Amir Ben-Dor, Elinor Dehan, Zohar Yakhini

Proceedings of the Algorithms in Bioinformatics, 4th International Workshop, 2004

Multiplexing Schemes for Generic SNP Genotyping Assays.

Roded Sharan, Amir Ben-Dor, Zohar Yakhini

Proceedings of the Biocomputing 2004, 2004

2003

Towards optimally multiplexed applications of universal DNA tag systems.

Amir Ben-Dor, Tzvika Hartman, Benno Schwikowski, Roded Sharan, Zohar Yakhini

Proceedings of the Sventh Annual International Conference on Computational Biology, 2003

Methods for Analysis and Visualization of SNP Genotype Data for Complex Diseases.

Anya Tsalenko, Amir Ben-Dor, Nancy Cox, Zohar Yakhini

Proceedings of the 8th Pacific Symposium on Biocomputing, 2003

2002

The restriction scaffold problem.

Amir Ben-Dor, Richard M. Karp, Benno Schwikowski, Ron Shamir

Proceedings of the Sixth Annual International Conference on Computational Biology, 2002

Discovering local structure in gene expression data: the order-preserving submatrix problem.

Amir Ben-Dor, Benny Chor, Richard M. Karp, Zohar Yakhini

Proceedings of the Sixth Annual International Conference on Computational Biology, 2002

2001

On the Complexity of Positional Sequencing by Hybridization

Piotr Berman, Amir Ben-Dor, Itsik Pe'er, Roded Sharan, Ron Shamir

Electron. Colloquium Comput. Complex., 2001

Class discovery in gene expression data.

Amir Ben-Dor, Nir Friedman, Zohar Yakhini

Proceedings of the Fifth Annual International Conference on Computational Biology, 2001

2000

Universal DNA tag systems: a combinatorial design scheme.

Amir Ben-Dor, Richard M. Karp, Benno Schwikowski, Zohar Yakhini

Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, 2000

Tissue classification with gene expression profiles.

Amir Ben-Dor, Laurakay Bruhn, Nir Friedman, Iftach Nachman, Michèl Schummer, Zohar Yakhini

Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, 2000

1999

A Note on the Influence of an epsilon-Biased Random Source.

Amir Ben-Dor, Anna R. Karlin, Nathan Linial, Yuri Rabinovich

J. Comput. Syst. Sci., 1999

Clustering Gene Expression Patterns.

Amir Ben-Dor, Ron Shamir, Zohar Yakhini

J. Comput. Biol., 1999

Clustering gene expression patterns.

Amir Ben-Dor, Zohar Yakhini

Proceedings of the Third Annual International Conference on Research in Computational Molecular Biology, 1999

On the Complexity of Positional Sequencing by Hybridization.

Amir Ben-Dor, Itsik Pe'er, Ron Shamir, Roded Sharan

Proceedings of the Combinatorial Pattern Matching, 10th Annual Symposium, 1999

1998

Constructing Phylogenies from Quartets: Elucidation of Eutherian Superordinal Relationships.

Amir Ben-Dor, Benny Chor, Dan Graur, Ron Ophir, Dan Pelleg

J. Comput. Biol., 1998

From four-taxon trees to phylogenies (preliminary report): the case of mammalian evolution.

Amir Ben-Dor, Benny Chor, Dan Graur, Ron Ophir, Dan Pelleg

Proceedings of the Second Annual International Conference on Research in Computational Molecular Biology, 1998

1997

Constructing radiation hybrid maps of the human genome.

Amir Ben-Dor

PhD thesis, 1997

On Constructing Radiation Hybrid Maps.

Amir Ben-Dor, Benny Chor

J. Comput. Biol., 1997

On constructing radiation hybrid maps (extended abstract).

Amir Ben-Dor, Benny Chor

Proceedings of the First Annual International Conference on Research in Computational Molecular Biology, 1997

Banishing Bias from Consensus Sequences.

Amir Ben-Dor, Giuseppe Lancia, Jennifer Perone, R. Ravi

Proceedings of the Combinatorial Pattern Matching, 8th Annual Symposium, 1997

1995

Dynamic Counting.

Amir Ben-Dor, Amos Israeli, Asaf Shirazi

Proceedings of the Third Israel Symposium on Theory of Computing and Systems, 1995

1994

Potential Function Analysis of Greedy Hot-Potato Routing.

Amir Ben-Dor, Shai Halevi, Assaf Schuster

Proceedings of the Thirteenth Annual ACM Symposium on Principles of Distributed Computing, 1994

1993

Zero-One Permanent is <i>#P</i>-Complete, A Simpler Proof.

Amir Ben-Dor, Shai Halevi

Proceedings of the Second Israel Symposium on Theory of Computing Systems, 1993