Simon Graham

According to our database, Simon Graham authored at least 41 papers between 2001 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

LYSTO: The Lymphocyte Assessment Hackathon and Benchmark Dataset.

Yiping Jiao, Jeroen van der Laak, Shadi Albarqouni, Zhang Li, Tao Tan, Abhir Bhalerao, Shenghua Cheng, Jiabo Ma, John Pocock, Josien P. W. Pluim, Navid Alemi Koohbanani, Raja Muhammad Saad Bashir, Shan-E-Ahmed Raza, Sibo Liu, Simon Graham, Suzanne C. Wetstein, Syed Ali Khurram, Xiuli Liu, Nasir M. Rajpoot, Mitko Veta, Francesco Ciompi

IEEE J. Biomed. Health Informatics, March, 2024

CoNIC Challenge: Pushing the frontiers of nuclear detection, segmentation, classification and counting.

Simon Graham, Quoc Dang Vu, Mostafa Jahanifar, Martin Weigert, Uwe Schmidt, Wenhua Zhang, Jun Zhang, Sen Yang, Jinxi Xiang, Xiyue Wang, Josef Lorenz Rumberger, Elias Baumann, Peter Hirsch, Lihao Liu, Chenyang Hong, Angelica I. Avilés-Rivero, Ayushi Jain, Heeyoung Ahn, Yiyu Hong, Hussam Azzuni, Min Xu, Mohammad Yaqub, Marie-Claire Blache, Benoît Piégu, Bertrand Vernay, Tim Scherr, Moritz Böhland, Katharina Löffler, Jiachen Li, Weiqin Ying, Chixin Wang, David R. J. Snead, Shan-E-Ahmed Raza, Fayyaz Minhas, Nasir M. Rajpoot

Medical Image Anal., February, 2024

2023

One model is all you need: Multi-task learning enables simultaneous histology image segmentation and classification.

Simon Graham, Quoc Dang Vu, Mostafa Jahanifar, Shan-E-Ahmed Raza, Fayyaz A. Afsar, David R. J. Snead, Nasir M. Rajpoot

Medical Image Anal., 2023

An Automated Pipeline for Tumour-Infiltrating Lymphocyte Scoring in Breast Cancer.

Adam J. Shephard, Mostafa Jahanifar, Ruoyu Wang, Muhammad Dawood, Simon Graham, Kastytis Sidlauskas, Syed Ali Khurram, Nasir M. Rajpoot, Shan E Ahmed Raza

CoRR, 2023

CoNIC Challenge: Pushing the Frontiers of Nuclear Detection, Segmentation, Classification and Counting.

Simon Graham, Quoc Dang Vu, Mostafa Jahanifar, Martin Weigert, Uwe Schmidt, Wenhua Zhang, Jun Zhang, Sen Yang, Jinxi Xiang, Xiyue Wang, Josef Lorenz Rumberger, Elias Baumann, Peter Hirsch, Lihao Liu, Chenyang Hong, Angelica I. Avilés-Rivero, Ayushi Jain, Heeyoung Ahn, Yiyu Hong, Hussam Azzuni, Min Xu, Mohammad Yaqub, Marie-Claire Blache, Benoît Piégu, Bertrand Vernay, Tim Scherr, Moritz Böhland, Katharina Löffler, Jiachen Li, Weiqin Ying, Chixin Wang, Dagmar Kainmueller, Carola-Bibiane Schönlieb, Shuolin Liu, Dhairya Talsania, Yughender Meda, Prakash Mishra, Muhammad Ridzuan, Oliver Neumann, Marcel P. Schilling, Markus Reischl, Ralf Mikut, Banban Huang, Hsiang-Chin Chien, Ching-Ping Wang, Chia-Yen Lee, Hong-Kun Lin, Zaiyi Liu, Xipeng Pan, Chu Han, Jijun Cheng, Muhammad Dawood, Srijay Deshpande, Raja Muhammad Saad Bashir, Adam Shephard, Pedro Costa, João D. Nunes, Aurélio Campilho, Jaime S. Cardoso, Hrishikesh P. S, Densen Puthussery, Devika R. G, Jiji C V, Ye Zhang, Zijie Fang, Zhifan Lin, Yongbing Zhang, Chunhui Lin, Liukun Zhang, Lijian Mao, Min Wu, Thi Tuong Vi Vo, Soo-Hyung Kim, Taebum Lee, Satoshi Kondo, Satoshi Kasai, Pranay Dumbhare, Vedant Phuse, Yash Dubey, Ankush Jamthikar, Trinh Thi Le Vuong, Jin Tae Kwak, Dorsa Ziaei, Hyun Jung, Tianyi Miao, David R. J. Snead, Shan-E-Ahmed Raza, Fayyaz Minhas, Nasir M. Rajpoot

CoRR, 2023

LYSTO: The Lymphocyte Assessment Hackathon and Benchmark Dataset.

Yiping Jiao, Jeroen van der Laak, Shadi Albarqouni, Zhang Li, Tao Tan, Abhir Bhalerao, Jiabo Ma, Jiamei Sun, Johnathon Pocock, Josien P. W. Pluim, Navid Alemi Koohbanani, Raja Muhammad Saad Bashir, Shan E Ahmed Raza, Sibo Liu, Simon Graham, Suzanne C. Wetstein, Syed Ali Khurram, Thomas Watson, Nasir M. Rajpoot, Mitko Veta, Francesco Ciompi

CoRR, 2023

Nuclear Segmentation and Classification: On Color & Compression Generalization.

Quoc Dang Vu, Robert Jewsbury, Simon Graham, Mostafa Jahanifar, Shan E Ahmed Raza, Fayyaz Minhas, Abhir Bhalerao, Nasir M. Rajpoot

CoRR, 2023

2022

SAFRON: Stitching Across the Frontier Network for Generating Colorectal Cancer Histology Images.

Srijay Deshpande, Fayyaz A. Minhas, Simon Graham, Nasir M. Rajpoot

Medical Image Anal., 2022

DigestPath: A benchmark dataset with challenge review for the pathological detection and segmentation of digestive-system.

Qian Da, Xiaodi Huang, Zhongyu Li, Yanfei Zuo, Chenbin Zhang, Jingxin Liu, Wen Chen, Jiahui Li, Dou Xu, Zhiqiang Hu, Hongmei Yi, Yan Guo, Zhe Wang, Ling Chen, Li Zhang, Xianying He, Xiaofan Zhang, Ke Mei, Chuang Zhu, Weizeng Lu, Linlin Shen, Jun Shi, Jun Li, Sreehari S, Ganapathy Krishnamurthi, Jiangcheng Yang, Tiancheng Lin, Qingyu Song, Xuechen Liu, Simon Graham, Raja Muhammad Saad Bashir, Canqian Yang, Shaofei Qin, Xinmei Tian, Baocai Yin, Jie Zhao, Dimitris N. Metaxas, Hongsheng Li, Chaofu Wang, Shaoting Zhang

Medical Image Anal., 2022

TIAger: Tumor-Infiltrating Lymphocyte Scoring in Breast Cancer for the TiGER Challenge.

Adam J. Shephard, Mostafa Jahanifar, Ruoyu Wang, Muhammad Dawood, Simon Graham, Kastytis Sidlauskas, Syed Ali Khurram, Nasir M. Rajpoot, Shan E Ahmed Raza

CoRR, 2022

One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification.

Simon Graham, Quoc Dang Vu, Mostafa Jahanifar, Fayyaz A. Minhas, David R. J. Snead, Nasir M. Rajpoot

CoRR, 2022

Nuclear Segmentation and Classification: On Color and Compression Generalization.

Quoc Dang Vu, Robert Jewsbury, Simon Graham, Mostafa Jahanifar, Shan-E-Ahmed Raza, Fayyaz Minhas, Abhir Bhalerao, Nasir M. Rajpoot

Proceedings of the Machine Learning in Medical Imaging - 13th International Workshop, 2022

Neural Graph Modelling of Whole Slide Images for Survival Ranking.

Callum Christopher Mackenzie, Muhammad Dawood, Simon Graham, Mark Eastwood, Fayyaz ul Amir Afsar Minhas

Proceedings of the Learning on Graphs Conference, 2022

IMPaSh: A Novel Domain-Shift Resistant Representation for Colorectal Cancer Tissue Classification.

Trinh Thi Le Vuong, Quoc Dang Vu, Mostafa Jahanifar, Simon Graham, Jin Tae Kwak, Nasir M. Rajpoot

Proceedings of the Computer Vision - ECCV 2022 Workshops, 2022

2021

MoNuSAC2020: A Multi-Organ Nuclei Segmentation and Classification Challenge.

Ruchika Verma, Neeraj Kumar, Abhijeet Patil, Nikhil Cherian Kurian, Swapnil Rane, Simon Graham, Quoc Dang Vu, Mieke Zwager, Shan-E-Ahmed Raza, Nasir M. Rajpoot, Xiyi Wu, Huai Chen, Yijie Huang, Lisheng Wang, Hyun Jung, G. Thomas Brown, Yanling Liu, Shuolin Liu, Seyed Alireza Fatemi Jahromi, Ali Asghar Khani, Ehsan Montahaei, Mahdieh Soleymani Baghshah, Hamid Behroozi, Pavel Semkin, Alexandr Rassadin, Prasad Dutande, Romil Lodaya, Ujjwal Baid, Bhakti Baheti, Sanjay N. Talbar, Amirreza Mahbod, Rupert Ecker, Isabella Ellinger, Zhipeng Luo, Bin Dong, Zhengyu Xu, Yuehan Yao, Shuai Lv, Ming Feng, Kele Xu, Hasib Zunair, Abdessamad Ben Hamza, Steven M. Smiley, Tang-Kai Yin, Qi-Rui Fang, Shikhar Srivastava, Dwarikanath Mahapatra, Lubomira Trnavska, Hanyun Zhang, Priya Lakshmi Narayanan, Justin Law, Yinyin Yuan, Abhiroop Tejomay, Aditya Mitkari, Dinesh Koka, Vikas Ramachandra, Lata Kini, Amit Sethi

IEEE Trans. Medical Imaging, 2021

CoNIC: Colon Nuclei Identification and Counting Challenge 2022.

Simon Graham, Mostafa Jahanifar, Quoc Dang Vu, Giorgos Hadjigeorghiou, Thomas Leech, David R. J. Snead, Shan E Ahmed Raza, Fayyaz A. Minhas, Nasir M. Rajpoot

CoRR, 2021

Semantic annotation for computational pathology: Multidisciplinary experience and best practice recommendations.

Noor ul Wahab, Islam M. Miligy, Katherine Dodd, Harvir Sahota, Michael Toss, Wenqi Lu, Mostafa Jahanifar, Mohsin Bilal, Simon Graham, Young Park, Giorgos Hadjigeorghiou, Abhir Bhalerao, Ayat Lashen, Asmaa Ibrahim, Ayaka Katayama, Henry O. Ebili, Matthew Parkin, Tom Sorell, Shan E Ahmed Raza, Emily Hero, Hesham Eldaly, Yee-Wah Tsang, Kishore Gopalakrishnan, David R. J. Snead, Emad Rakha, Nasir M. Rajpoot, Fayyaz A. Minhas

CoRR, 2021

Simultaneous Nuclear Instance and Layer Segmentation in Oral Epithelial Dysplasia.

Adam J. Shephard, Simon Graham, Raja Muhammad Saad Bashir, Mostafa Jahanifar, Hanya Mahmood, Syed Ali Khurram, Nasir M. Rajpoot

Proceedings of the IEEE/CVF International Conference on Computer Vision Workshops, 2021

Lizard: A Large-Scale Dataset for Colonic Nuclear Instance Segmentation and Classification.

Simon Graham, Mostafa Jahanifar, Ayesha Azam, Mohammed Nimir, Yee-Wah Tsang, Katherine Dodd, Emily Hero, Harvir Sahota, Atisha Tank, Ksenija Benes, Noorul Wahab, Fayyaz A. Minhas, Shan-E-Ahmed Raza, Hesham Eldaly, Kishore Gopalakrishnan, David R. J. Snead, Nasir M. Rajpoot

Proceedings of the IEEE/CVF International Conference on Computer Vision Workshops, 2021

2020

Localisation and symmetry in computational pathology.

Simon Graham

PhD thesis, 2020

A Multi-Organ Nucleus Segmentation Challenge.

Neeraj Kumar, Ruchika Verma, Deepak Anand, Yanning Zhou, Omer Fahri Onder, Efstratios Tsougenis, Hao Chen, Pheng-Ann Heng, Jiahui Li, Zhiqiang Hu, Yunzhi Wang, Navid Alemi Koohbanani, Mostafa Jahanifar, Neda Zamani Tajeddin, Ali Gooya, Nasir M. Rajpoot, Xuhua Ren, Sihang Zhou, Qian Wang, Dinggang Shen, Cheng-Kun Yang, Chi-Hung Weng, Wei-Hsiang Yu, Chao-Yuan Yeh, Shuang Yang, Shuoyu Xu, Pak-Hei Yeung, Peng Sun, Amirreza Mahbod, Gerald Schaefer, Isabella Ellinger, Rupert Ecker, Örjan Smedby, Chunliang Wang, Benjamin Chidester, That-Vinh Ton, Minh-Triet Tran, Jian Ma, Minh N. Do, Simon Graham, Quoc Dang Vu, Jin Tae Kwak, Akshaykumar Gunda, Raviteja Chunduri, Corey Hu, Xiaoyang Zhou, Dariush Lotfi, Reza Safdari, Antanas Kascenas, Alison O'Neil, Dennis Eschweiler, Johannes Stegmaier, Yanping Cui, Baocai Yin, Kailin Chen, Xinmei Tian, Philipp Grüning, Erhardt Barth, Elad Arbel, Itay Remer, Amir Ben-Dor, Ekaterina Sirazitdinova, Matthias Kohl, Stefan Braunewell, Yuexiang Li, Xinpeng Xie, Linlin Shen, Jun Ma, Krishanu Das Baksi, Mohammad Azam Khan, Jaegul Choo, Adrián Colomer, Valery Naranjo, Linmin Pei, Khan M. Iftekharuddin, Kaushiki Roy, Debotosh Bhattacharjee, Aníbal Pedraza, Maria Gloria Bueno, Sabarinathan Devanathan, Saravanan Radhakrishnan, Praveen Koduganty, Zihan Wu, Guanyu Cai, Xiaojie Liu, Yuqin Wang, Amit Sethi

IEEE Trans. Medical Imaging, 2020

Dense Steerable Filter CNNs for Exploiting Rotational Symmetry in Histology Images.

Simon Graham, David B. A. Epstein, Nasir M. Rajpoot

IEEE Trans. Medical Imaging, 2020

FABnet: feature attention-based network for simultaneous segmentation of microvessels and nerves in routine histology images of oral cancer.

M. M. Fraz, Syed Ali Khurram, Simon Graham, Muhammad Shaban, Mariam Hassan, Asif Loya, Nasir M. Rajpoot

Neural Comput. Appl., 2020

SAFRON: Stitching Across the Frontier for Generating Colorectal Cancer Histology Images.

Srijay Deshpande, Fayyaz A. Minhas, Simon Graham, Nasir M. Rajpoot

CoRR, 2020

PanNuke Dataset Extension, Insights and Baselines.

Jevgenij Gamper, Navid Alemi Koohbanani, Simon Graham, Mostafa Jahanifar, Syed Ali Khurram, Ayesha Azam, Katherine Hewitt, Nasir M. Rajpoot

CoRR, 2020

Capturing Cellular Topology in Multi-Gigapixel Pathology Images.

Wenqi Lu, Simon Graham, Mohsin Bilal, Nasir M. Rajpoot, Fayyaz A. Minhas

Proceedings of the 2020 IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2020

2019

Fast ScanNet: Fast and Dense Analysis of Multi-Gigapixel Whole-Slide Images for Cancer Metastasis Detection.

Huangjing Lin, Hao Chen, Simon Graham, Qi Dou, Nasir M. Rajpoot, Pheng-Ann Heng

IEEE Trans. Medical Imaging, 2019

Micro-Net: A unified model for segmentation of various objects in microscopy images.

Shan E Ahmed Raza, Linda Cheung, Muhammad Shaban, Simon Graham, David B. A. Epstein, Stella Pelengaris, Michael Khan, Nasir M. Rajpoot

Medical Image Anal., 2019

Hover-Net: Simultaneous segmentation and classification of nuclei in multi-tissue histology images.

Simon Graham, Quoc Dang Vu, Shan E Ahmed Raza, Ayesha Azam, Yee-Wah Tsang, Jin Tae Kwak, Nasir M. Rajpoot

Medical Image Anal., 2019

MILD-Net: Minimal information loss dilated network for gland instance segmentation in colon histology images.

Simon Graham, Hao Chen, Jevgenij Gamper, Qi Dou, Pheng-Ann Heng, David R. J. Snead, Yee-Wah Tsang, Nasir M. Rajpoot

Medical Image Anal., 2019

CGC-Net: Cell Graph Convolutional Network for Grading of Colorectal Cancer Histology Images.

Yanning Zhou, Simon Graham, Navid Alemi Koohbanani, Muhammad Shaban, Pheng-Ann Heng, Nasir M. Rajpoot

Proceedings of the 2019 IEEE/CVF International Conference on Computer Vision Workshops, 2019

Rota-Net: Rotation Equivariant Network for Simultaneous Gland and Lumen Segmentation in Colon Histology Images.

Simon Graham, David B. A. Epstein, Nasir M. Rajpoot

Proceedings of the Digital Pathology - 15th European Congress, 2019

2018

XY Network for Nuclear Segmentation in Multi-Tissue Histology Images.

Simon Graham, Quoc Dang Vu, Shan E Ahmed Raza, Jin Tae Kwak, Nasir M. Rajpoot

CoRR, 2018

Methods for Segmentation and Classification of Digital Microscopy Tissue Images.

Quoc Dang Vu, Simon Graham, Minh Nguyen Nhat To, Muhammad Shaban, Talha Qaiser, Navid Alemi Koohbanani, Syed Ali Khurram, Tahsin M. Kurç, Keyvan Farahani, Tianhao Zhao, Rajarsi R. Gupta, Jin Tae Kwak, Nasir M. Rajpoot, Joel H. Saltz

CoRR, 2018

Predicting breast tumor proliferation from whole-slide images: the TUPAC16 challenge.

Mitko Veta, Yujing J. Heng, Nikolas Stathonikos, Babak Ehteshami Bejnordi, Francisco Beca, Thomas Wollmann, Karl Rohr, Manan A. Shah, Dayong Wang, Mikaël Rousson, Martin Hedlund, David Tellez, Francesco Ciompi, Erwan Zerhouni, David Lanyi, Matheus Palhares Viana, Vassili Kovalev, Vitali Liauchuk, Hady Ahmady Phoulady, Talha Qaiser, Simon Graham, Nasir M. Rajpoot, Erik Sjöblom, Jesper Molin, Kyunghyun Paeng, Sangheum Hwang, Sunggyun Park, Zhipeng Jia, Eric I-Chao Chang, Yan Xu, Andrew H. Beck, Paul J. van Diest, Josien P. W. Pluim

CoRR, 2018

MILD-Net: Minimal Information Loss Dilated Network for Gland Instance Segmentation in Colon Histology Images.

Simon Graham, Hao Chen, Qi Dou, Pheng-Ann Heng, Nasir M. Rajpoot

CoRR, 2018

Classification of lung cancer histology images using patch-level summary statistics.

Simon Graham, Muhammad Shaban, Talha Qaiser, Syed Ali Khurram, Nasir M. Rajpoot

Proceedings of the Medical Imaging 2018: Digital Pathology, 2018

Uncertainty Driven Pooling Network for Microvessel Segmentation in Routine Histology Images.

M. M. Fraz, Muhammad Shaban, Simon Graham, Syed Ali Khurram, Nasir M. Rajpoot

Proceedings of the Computational Pathology and Ophthalmic Medical Image Analysis, 2018

Leveraging Unlabeled Whole-Slide-Images for Mitosis Detection.

Saad Ullah Akram, Talha Qaiser, Simon Graham, Juho Kannala, Janne Heikkilä, Nasir M. Rajpoot

Proceedings of the Computational Pathology and Ophthalmic Medical Image Analysis, 2018

SAMS-NET: Stain-aware multi-scale network for instance-based nuclei segmentation in histology images.

Simon Graham, Nasir M. Rajpoot

Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018

2001

Mobilizing a graduate school.

Simon Graham

Proceedings of the 29th Annual ACM SIGUCCS Conference on User Services 2001, 2001