Bart Deplancke

According to our database, Bart Deplancke authored at least 7 papers between 2010 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

FAIR sharing of Chromatin Tracing datasets using the newly developed 4DN FISH Omics Format.

Rahi Navelkar, Andrea Cosolo, Bogdan Bintu, Yubao Cheng, Vincent Gardeux, Silvia Gutnik, Taihei Fujimori, Antonina Hafner, Atishay Jay, Bojing Blair Jia, Adam Paul Jussila, Gerard Llimos, Antonios Lioutas, Nuno MC Martins, William J. Moore, Yodai Takei, Frances Wong, Kaifu Yang, Huaiying Zhang, Quan Zhu, Magda Bienko, Lacramioara Bintu, Long Cai, Bart Deplancke, Marcelo Nollmann, Susan E. Mango, Bing Ren, Peter J. Park, Ahilya N. Sawh, Andrew Schroeder, Jason R. Swedlow, Golnaz Vahedi, Chao-Ting Wu, Sarah Aufmkolk, Alistair N. Boettiger, Irene Farabella, Caterina Strambio-De-Castillia, Siyuan Wang

CoRR, August, 2025

2020

ASAP 2020 update: an open, scalable and interactive web-based portal for (single-cell) omics analyses.

Fabrice P. A. David, Maria Litovchenko, Bart Deplancke, Vincent Gardeux

Nucleic Acids Res., 2020

2017

GETPrime 2.0: gene- and transcript-specific qPCR primers for 13 species including polymorphisms.

Fabrice P. A. David, Jacques Rougemont, Bart Deplancke

Nucleic Acids Res., 2017

ASAP: a web-based platform for the analysis and interactive visualization of single-cell RNA-seq data.

Vincent Gardeux, Fabrice P. A. David, Adrian Shajkofci, Petra C. Schwalie, Bart Deplancke

Bioinform., 2017

2014

Identification and removal of low-complexity sites in allele-specific analysis of ChIP-seq data.

Sebastian M. Waszak, Helena Kilpinen, Andreas R. Gschwind, Andrea Orioli, Sunil K. Raghav, Robert M. Witwicki, Eugenia Migliavacca, Alisa Yurovsky, Tuuli Lappalainen, Nouria Hernandez, Alexandre Reymond, Emmanouil T. Dermitzakis, Bart Deplancke

Bioinform., 2014

2011

GETPrime: a gene- or transcript-specific primer database for quantitative real-time PCR.

Carine Gubelmann, Alexandre Gattiker, Andreas Massouras, Korneel Hens, Fabrice P. A. David, Frederik Decouttere, Jacques Rougemont, Bart Deplancke

Database J. Biol. Databases Curation, 2011

2010

WebPrInSeS: automated full-length clone sequence identification and verification using high-throughput sequencing data.

Andreas Massouras, Frederik Decouttere, Korneel Hens, Bart Deplancke

Nucleic Acids Res., 2010