Casey W. Dunn

According to our database, Casey W. Dunn authored at least 7 papers between 2008 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

Sharkmer: repurposing PCR primers for targeted genome assembly using <i>in silico</i> PCR.

Casey W. Dunn, Samuel H. Church

Bioinform., 2026

2025

T-shaped alignments integrating HIV-1 near full-length genome and partial pol sequences can improve phylogenetic inference of transmission clusters.

August Guang, Casey W. Dunn, Vlad Novitsky, Mark Howison, Rami Kantor

PLoS Comput. Biol., 2025

2024

Normalizing need not be the norm: count-based math for analyzing single-cell data.

Samuel H. Church, Jasmine L. Mah, Günter P. Wagner, Casey W. Dunn

Theory Biosci., February, 2024

2013

Agalma: an automated phylogenomics workflow.

Casey W. Dunn, Mark Howison, Felipe Zapata

BMC Bioinform., 2013

Toward a statistically explicit understanding of <i>de novo</i> sequence assembly.

Mark Howison, Felipe Zapata, Casey W. Dunn

Bioinform., 2013

2012

BioLite, a Lightweight Bioinformatics Framework with Automated Tracking of Diagnostics and Provenance.

Mark Howison, Nicholas A. Sinnott-Armstrong, Casey W. Dunn

Proceedings of the 4th Workshop on the Theory and Practice of Provenance, 2012

2008

Phyutility: a phyloinformatics tool for trees, alignments and molecular data.

Stephen A. Smith, Casey W. Dunn

Bioinform., 2008