Damien Woods

Orcid: 0000-0002-0638-2690

Affiliations:
  • Maynooth University, Hamilton Institute, Ireland
  • INRIA, France
  • California Institute of Technology, Computer Science, Pasadena, CA, USA


According to our database1, Damien Woods authored at least 55 papers between 2001 and 2023.

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Bibliography

2023
Algorithmic Foundations of Programmable Matter (Dagstuhl Seminar 23091).
Dagstuhl Reports, February, 2023

Harvesting Brownian Motion: Zero Energy Computational Sampling.
CoRR, 2023

Minimum Free Energy, Partition Function and Kinetics Simulation Algorithms for a Multistranded Scaffolded DNA Computer.
Proceedings of the 29th International Conference on DNA Computing and Molecular Programming, 2023

2021
On the hardness of knowing busy beaver values BB(15) and BB(5, 4).
CoRR, 2021

Small Tile Sets That Compute While Solving Mazes.
Proceedings of the 27th International Conference on DNA Computing and Molecular Programming, 2021

2020
Limitations on counting in Boolean circuits and self-assembly.
CoRR, 2020

The program-size complexity of self-assembled paths.
Proceedings of the 52nd Annual ACM SIGACT Symposium on Theory of Computing, 2020

The Collatz Process Embeds a Base Conversion Algorithm.
Proceedings of the Reachability Problems - 14th International Conference, 2020

Turning Machines.
Proceedings of the 26th International Conference on DNA Computing and Molecular Programming, 2020

2019
Diverse and robust molecular algorithms using reprogrammable DNA self-assembly.
Nat., 2019

2018
Preface.
Nat. Comput., 2018

2017
The non-cooperative tile assembly model is not intrinsically universal or capable of bounded Turing machine simulation.
Proceedings of the 49th Annual ACM SIGACT Symposium on Theory of Computing, 2017

Thermodynamic Binding Networks.
Proceedings of the DNA Computing and Molecular Programming - 23rd International Conference, 2017

2016
Intrinsic Universality in Self-Assembly.
Encyclopedia of Algorithms, 2016

Active Self-Assembly and Molecular Robotics with Nubots.
Encyclopedia of Algorithms, 2016

The Two-Handed Tile Assembly Model is not Intrinsically Universal.
Algorithmica, 2016

2015
Parallel computation using active self-assembly.
Nat. Comput., 2015

Yurii Rogozhin's Contributions to the Field of Small Universal Turing Machines.
Fundam. Informaticae, 2015

Tag Systems and the Complexity of Simple Programs.
Proceedings of the Cellular Automata and Discrete Complex Systems, 2015

2014
Wang's B machines are efficiently universal, as is Hasenjaeger's small universal electromechanical toy.
J. Complex., 2014

Uniformity is Weaker than Semi-Uniformity for Some Membrane Systems.
Fundam. Informaticae, 2014

Intrinsic universality in tile self-assembly requires cooperation.
Proceedings of the Twenty-Fifth Annual ACM-SIAM Symposium on Discrete Algorithms, 2014

One Tile to Rule Them All: Simulating Any Tile Assembly System with a Single Universal Tile.
Proceedings of the Automata, Languages, and Programming - 41st International Colloquium, 2014

Fast Algorithmic Self-assembly of Simple Shapes Using Random Agitation.
Proceedings of the DNA Computing and Molecular Programming - 20th International Conference, 2014

2013
AND and/or OR: Uniform Polynomial-Size Circuits
Proceedings of the Proceedings Machines, Computations and Universality 2013, 2013

Intrinsic universality and the computational power of self-assembly.
Proceedings of the Proceedings Machines, Computations and Universality 2013, 2013

Active self-assembly of algorithmic shapes and patterns in polylogarithmic time.
Proceedings of the Innovations in Theoretical Computer Science, 2013

2012
One Tile to Rule Them All: Simulating Any Turing Machine, Tile Assembly System, or Tiling System with a Single Puzzle Piece
CoRR, 2012

The Tile Assembly Model is Intrinsically Universal.
Proceedings of the 53rd Annual IEEE Symposium on Foundations of Computer Science, 2012

2011
Preface.
Theor. Comput. Sci., 2011

The computational power of membrane systems under tight uniformity conditions.
Nat. Comput., 2011

2010
Intrinsic Universality in Self-Assembly.
Proceedings of the 27th International Symposium on Theoretical Aspects of Computer Science, 2010

2009
Optical Computing.
Proceedings of the Encyclopedia of Complexity and Systems Science, 2009

The complexity of small universal Turing machines: A survey.
Theor. Comput. Sci., 2009

Small Semi-Weakly Universal Turing Machines.
Fundam. Informaticae, 2009

Four Small Universal Turing Machines.
Fundam. Informaticae, 2009

Optical computing.
Appl. Math. Comput., 2009

Membrane Dissolution and Division in P.
Proceedings of the Unconventional Computation, 8th International Conference, 2009

Random Number Selection in Self-assembly.
Proceedings of the Unconventional Computation, 8th International Conference, 2009

Small Weakly Universal Turing Machines.
Proceedings of the Fundamentals of Computation Theory, 17th International Symposium, 2009

2008
Lower bounds on the computational power of an optical model of computation.
Nat. Comput., 2008

Implementations of a Model of Physical Sorting.
Int. J. Unconv. Comput., 2008

On acceptance conditions for membrane systems: characterisations of L and NL
Proceedings of the Proceedings International Workshop on The Complexity of Simple Programs, 2008

A Characterisation of NL Using Membrane Systems without Charges and Dissolution.
Proceedings of the Unconventional Computing, 7th International Conference, 2008

Parallel and Sequential Optical Computing.
Proceedings of the Optical Super Computing, First International Workshop, 2008

2007
Active Membrane Systems Without Charges and Using Only Symmetric Elementary Division Characterise P.
Proceedings of the Membrane Computing, 8th International Workshop, 2007

The Complexity of Small Universal Turing Machines.
Proceedings of the Computation and Logic in the Real World, 2007

2006
Small fast universal Turing machines.
Theor. Comput. Sci., 2006

Optical Computing and Computational Complexity.
Proceedings of the Unconventional Computation, 5th International Conference, 2006

P-completeness of Cellular Automaton Rule 110.
Proceedings of the Automata, Languages and Programming, 33rd International Colloquium, 2006

On the time complexity of 2-tag systems and small universal Turing machines.
Proceedings of the 47th Annual IEEE Symposium on Foundations of Computer Science (FOCS 2006), 2006

2005
An optical model of computation.
Theor. Comput. Sci., 2005

Upper Bounds on the Computational Power of an Optical Model of Computation.
Proceedings of the Algorithms and Computation, 16th International Symposium, 2005

Complexity of Continuous Space Machine Operations.
Proceedings of the New Computational Paradigms, 2005

2001
On the Computational Power of a Continuous-Space Optical Model of Computation.
Proceedings of the Machines, 2001


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