David J. Reiss

According to our database, David J. Reiss authored at least 12 papers between 2004 and 2015.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2015

Bicluster Sampled Coherence Metric (BSCM) provides an accurate environmental context for phenotype predictions.

Samuel A. Danziger, David J. Reiss, Alexander V. Ratushny, Jennifer J. Smith, Christopher L. Plaisier, John D. Aitchison, Nitin S. Baliga

BMC Syst. Biol., 2015

2014

Network portal: a database for storage, analysis and visualization of biological networks.

Serdar Turkarslan, Elisabeth J. Wurtmann, Wei-Ju Wu, Ning Jiang, J. Christopher Bare, Karen Foley, David J. Reiss, Pavel S. Novichkov, Nitin S. Baliga

Nucleic Acids Res., 2014

Evolution of context dependent regulation by expansion of feast/famine regulatory proteins.

Christopher L. Plaisier, Fang-Yin Lo, Justin Ashworth, Aaron N. Brooks, Karlyn D. Beer, Amardeep Kaur, Min Pan, David J. Reiss, Marc T. Facciotti, Nitin S. Baliga

BMC Syst. Biol., 2014

2010

Large scale physiological readjustment during growth enables rapid, comprehensive and inexpensive systems analysis.

Marc T. Facciotti, Wyming Lee Pang, Fang-Yin Lo, Kenia Whitehead, Tie Koide, Ken-ichi Masumura, Min Pan, Amardeep Kaur, David J. Larsen, David J. Reiss, Linh Hoang, Ewa Kalisiak, Trent Northen, Sunia A. Trauger, Gary Siuzdak, Nitin S. Baliga

BMC Syst. Biol., 2010

Integration and visualization of systems biology data in context of the genome.

J. Christopher Bare, Tie Koide, David J. Reiss, Dan Tenenbaum, Nitin S. Baliga

BMC Bioinform., 2010

Learning transcriptional networks from the integration of ChIP-chip and expression data in a non-parametric model.

Ahrim Youn, David J. Reiss, Werner Stuetzle

Bioinform., 2010

2008

Model-based deconvolution of genome-wide DNA binding.

David J. Reiss, Marc T. Facciotti, Nitin S. Baliga

Bioinform., 2008

2007

BioNetBuilder: automatic integration of biological networks.

Iliana Avila-Campillo, Kevin Drew, John Lin, David J. Reiss, Richard Bonneau

Bioinform., 2007

2006

The Gaggle: An open-source software system for integrating bioinformatics software and data sources.

Paul T. Shannon, David J. Reiss, Richard Bonneau, Nitin S. Baliga

BMC Bioinform., 2006

Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks.

David J. Reiss, Nitin S. Baliga, Richard Bonneau

BMC Bioinform., 2006

2005

Tools enabling the elucidation of molecular pathways active in human disease: Application to Hepatitis C virus infection.

David J. Reiss, Iliana Avila-Campillo, Vesteinn Thorsson, Benno Schwikowski, Timothy Galitski

BMC Bioinform., 2005

2004

Predicting protein-peptide interactions via a network-based motif sampler.

David J. Reiss, Benno Schwikowski

Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004