Gaetan De Waele

According to our database, Gaetan De Waele authored at least 6 papers between 2022 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

When should we trust the annotation? Selective prediction for molecular structure retrieval from mass spectra.

Mira Jürgens, Gaetan De Waele, Morteza Rakhshaninejad, Willem Waegeman

CoRR, March, 2026

Small molecule retrieval from tandem mass spectrometry: what are we optimizing for?

Gaetan De Waele, Marek Wydmuch, Krzysztof Dembczynski, Wojciech Kotlowski, Willem Waegeman

CoRR, February, 2026

Reliable Molecular Retrieval from Mass Spectra Using Conformal Prediction.

Morteza Rakhshaninejad, Gaetan De Waele, Mira Jürgens, Willem Waegeman

J. Chem. Inf. Model., 2026

How negative sampling shapes the performance of transcription factor binding site prediction models.

Natan Tourne, Gaetan De Waele, Vanessa Vermeirssen, Willem Waegeman

Bioinform., 2026

2025

Pre-trained Maldi Transformers improve MALDI-TOF MS-based prediction.

Gaetan De Waele, Gerben Menschaert, Peter Vandamme, Willem Waegeman

Comput. Biol. Medicine, 2025

2022

CpG Transformer for imputation of single-cell methylomes.

Gaetan De Waele, Jim Clauwaert, Gerben Menschaert, Willem Waegeman

Bioinform., 2022