Giacomo Baruzzo

According to our database, Giacomo Baruzzo authored at least 13 papers between 2018 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

MOV&RSim: computational modelling of cancer-specific variants and sequencing reads characteristics for realistic tumoral sample simulation.

Francesca Longhin, Giacomo Baruzzo, Enidia Hazizaj, Diego Boscarino, Dino Paladin, Barbara Di Camillo

BMC Bioinform., December, 2025

Advances and challenges in cell-cell communication inference: a comprehensive review of tools, resources, and future directions.

Giulia Cesaro, James Shiniti Nagai, Nicolò Gnoato, Alice Chiodi, Gaia Tussardi, Vanessa Klöker, Carmelo Vittorio Musumarra, Ettore Mosca, Ivan G. Costa, Barbara Di Camillo, Enrica Calura, Giacomo Baruzzo

Briefings Bioinform., 2025

Validity of Feature Importance in Low-Performing Machine Learning for Tabular Biomedical Data.

Youngro Lee, Giacomo Baruzzo, Jeonghwan Kim, Jong-Mo Seo, Barbara Di Camillo

IEEE Access, 2025

quickSparseM: a library for memory- and time-efficient computation on large, sparse matrices with application to omics data.

Giacomo Baruzzo, Giulia Cesaro, Barbara Di Camillo

Proceedings of the 33rd Euromicro International Conference on Parallel, 2025

Biologically Informed procedure for Feature Summarization in Spatial Transcriptomics.

Matteo Baldan, Giulia Cesaro, Giacomo Baruzzo, Barbara Di Camillo

Proceedings of the International Joint Conference on Neural Networks, 2025

2024

Validity of Feature Importance in Low-Performing Machine Learning for Tabular Biomedical Data.

Youngro Lee, Giacomo Baruzzo, Jeonghwan Kim, Jongmo Seo, Barbara Di Camillo

CoRR, 2024

2022

Investigating differential abundance methods in microbiome data: A benchmark study.

Marco Cappellato, Giacomo Baruzzo, Barbara Di Camillo

PLoS Comput. Biol., September, 2022

Identify, quantify and characterize cellular communication from single-cell RNA sequencing data with <i>scSeqComm</i>.

Giacomo Baruzzo, Giulia Cesaro, Barbara Di Camillo

Bioinform., 2022

2021

ITSoneWB: profiling global taxonomic diversity of eukaryotic communities on Galaxy.

Marco Antonio Tangaro, Giuseppe Defazio, Bruno Fosso, Vito Flavio Licciulli, Giorgio Grillo, Giacinto Donvito, Enrico Lavezzo, Giacomo Baruzzo, Graziano Pesole, Monica Santamaria

Bioinform., November, 2021

Beware to ignore the rare: how imputing zero-values can improve the quality of 16S rRNA gene studies results.

Giacomo Baruzzo, Ilaria Patuzzi, Barbara Di Camillo

BMC Bioinform., 2021

2020

SPARSim single cell: a count data simulator for scRNA-seq data.

Giacomo Baruzzo, Ilaria Patuzzi, Barbara Di Camillo

Bioinform., 2020

2019

metaSPARSim: a 16S rRNA gene sequencing count data simulator.

Ilaria Patuzzi, Giacomo Baruzzo, Carmen Losasso, Antonia Ricci, Barbara Di Camillo

BMC Bioinform., 2019

2018

Optimizing PCR primers targeting the bacterial 16S ribosomal RNA gene.

Francesco Sambo, Francesca Finotello, Enrico Lavezzo, Giacomo Baruzzo, Giulia Masi, Elektra Peta, Marco Falda, Stefano Toppo, Luisa Barzon, Barbara Di Camillo

BMC Bioinform., 2018