Guangchuang Yu

According to our database, Guangchuang Yu authored at least 11 papers between 2009 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Robust expansion of phylogeny for fast-growing genome sequence data.

Yongtao Ye, Marcus H. Shum, Joseph L. Tsui, Guangchuang Yu, David K. Smith, Huachen Zhu, Joseph T. Wu, Yi Guan, Tommy Tsan-Yuk Lam

PLoS Comput. Biol., February, 2024

2022

<i>CBNplot</i>: Bayesian network plots for enrichment analysis.

Noriaki Sato, Yoshinori Tamada, Guangchuang Yu, Yasushi Okuno

Bioinform., 2022

ggmsa: a visual exploration tool for multiple sequence alignment and associated data.

Lang Zhou, Tingze Feng, Shuangbin Xu, Fangluan Gao, Tommy T. Lam, Qianwen Wang, Tianzhi Wu, Huina Huang, Li Zhan, Lin Li, Yi Guan, Zehan Dai, Guangchuang Yu

Briefings Bioinform., 2022

2020

TreeSummarizedExperiment: a S4 class for data with hierarchical structure.

Ruizhu Huang, Charlotte Soneson, Felix G. M. Ernst, Kevin C. Rue-Albrecht, Guangchuang Yu, Stephanie C. Hicks, Mark D. Robinson

F1000Research, 2020

2019

<i>RIdeogram</i>: drawing SVG graphics to visualize and map genome-wide data on the idiograms.

Zhaodong Hao, Dekang Lv, Ying Ge, Jisen Shi, Dolf Weijers, Guangchuang Yu, Jinhui Chen

PeerJ Prepr., 2019

2018

Using meshes for MeSH term enrichment and semantic analyses.

Guangchuang Yu

Bioinform., 2018

2015

DOSE: an R/Bioconductor package for disease ontology semantic and enrichment analysis.

Guangchuang Yu, Li-Gen Wang, Guang-Rong Yan, Qing-Yu He

Bioinform., 2015

ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization.

Guangchuang Yu, Li-Gen Wang, Qing-Yu He

Bioinform., 2015

2011

Functional similarity analysis of human virus-encoded miRNAs.

Guangchuang Yu, Qing-Yu He

J. Clin. Bioinform., 2011

2010

GOSemSim: an R package for measuring semantic similarity among GO terms and gene products.

Guangchuang Yu, Fei Li, Yide Qin, Xiaochen Bo, Yibo Wu, Shengqi Wang

Bioinform., 2010

2009

Towards a Comprehensive HBV-Human Interaction Map.

Fei Li, Yuxing Peng, Wenjian Xu, Guangchuang Yu, Peng Li, Xiaochen Bo, Shengqi Wang

Proceedings of the International Joint Conferences on Bioinformatics, 2009