Xiaochen Bo
Orcid: 0000-0003-1911-7922
According to our database1,
Xiaochen Bo
authored at least 72 papers
between 2001 and 2024.
Collaborative distances:
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Bibliography
2024
Database J. Biol. Databases Curation, January, 2024
2023
EDST: a decision stump based ensemble algorithm for synergistic drug combination prediction.
BMC Bioinform., December, 2023
COMMO: a web server for the identification and analysis of consensus gene modules across multiple methods.
Bioinform., December, 2023
Adv. Intell. Syst., May, 2023
Multim. Tools Appl., April, 2023
Nucleic Acids Res., January, 2023
GADRP: graph convolutional networks and autoencoders for cancer drug response prediction.
Briefings Bioinform., January, 2023
HSGCL-DTA: Hybrid-scale Graph Contrastive Learning based Drug-Target Binding Affinity Prediction.
Proceedings of the 35th IEEE International Conference on Tools with Artificial Intelligence, 2023
Drug-target and Drug-disease Association Prediction based on Drug-target-disease Network and Multi-task Learning.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
MoSCHG: Multi-omics Single-cell Classification based on Heterogeneous Graphs and Supervised Contrastive Learning.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
A Multi-View Learning-Based Bayesian Ruleset Extraction Algorithm For Accurate Hepatotoxicity Prediction.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
2022
Genom. Proteom. Bioinform., August, 2022
Inferring transcription factor regulatory networks from single-cell ATAC-seq data based on graph neural networks.
Nat. Mach. Intell., 2022
ExpressVis: a biologist-oriented interactive web server for exploring multi-omics data.
Nucleic Acids Res., 2022
PLA-MoRe: A Protein-Ligand Binding Affinity Prediction Model via Comprehensive Molecular Representations.
J. Chem. Inf. Model., 2022
Systematic optimization of host-directed therapeutic targets and preclinical validation of repositioned antiviral drugs.
Briefings Bioinform., 2022
Briefings Bioinform., 2022
Briefings Bioinform., 2022
DTI-HETA: prediction of drug-target interactions based on GCN and GAT on heterogeneous graph.
Briefings Bioinform., 2022
Briefings Bioinform., 2022
A Multi-View Learning-Based Rule Extraction Algorithm For Accurate Hepatotoxicity Prediction.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022
2021
NegStacking: Drug-Target Interaction Prediction Based on Ensemble Learning and Logistic Regression.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021
COMSUC: A web server for the identification of consensus molecular subtypes of cancer based on multiple methods and multi-omics data.
PLoS Comput. Biol., 2021
Synthetic Lethal Interactions Prediction Based on Multiple Similarity Measures Fusion.
J. Comput. Sci. Technol., 2021
BMC Bioinform., 2021
Spatial density of open chromatin: an effective metric for the functional characterization of topologically associated domains.
Briefings Bioinform., 2021
A Metagraph-Based Model for Predicting Drug-Target Interaction on Heterogeneous Network.
Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2021, 2021
Drug-target interaction prediction based on nonnegative and self-representative matrix factorization.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021
2020
PLoS Comput. Biol., 2020
PIMD: An Integrative Approach for Drug Repositioning Using Multiple Characterization Fusion.
Genom. Proteom. Bioinform., 2020
Domain-adversarial multi-task framework for novel therapeutic property prediction of compounds.
Bioinform., 2020
New insights on human essential genes based on integrated analysis and the construction of the HEGIAP web-based platform.
Briefings Bioinform., 2020
Proceedings of the 32nd IEEE International Conference on Tools with Artificial Intelligence, 2020
2019
Stable H3K4me3 is associated with transcription initiation during early embryo development.
Bioinform., 2019
LIVE: a manually curated encyclopedia of experimentally validated interactions of lncRNAs.
Database J. Biol. Databases Curation, 2019
A survey and evaluation of Web-based tools/databases for variant analysis of TCGA data.
Briefings Bioinform., 2019
2018
Domain-Adversarial Multi-Task Framework for Novel Therapeutic Property Prediction of Compounds.
CoRR, 2018
DTI-RCNN: New Efficient Hybrid Neural Network Model to Predict Drug-Target Interactions.
Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2018, 2018
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
Proceedings of the Advanced Computer Architecture - 12th Conference, 2018
2017
3DSNP: a database for linking human noncoding SNPs to their three-dimensional interacting genes.
Nucleic Acids Res., 2017
BMC Bioinform., 2017
BiRen: predicting enhancers with a deep-learning-based model using the DNA sequence alone.
Bioinform., 2017
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017
2016
Nucleic Acids Res., 2016
BMC Bioinform., 2016
<i>De novo</i> identification of replication-timing domains in the human genome by deep learning.
Bioinform., 2016
2015
EHFPI: a database and analysis resource of essential host factors for pathogenic infection.
Nucleic Acids Res., 2015
New insights into the landscape relationships of host response to bacterial pathogens.
Proceedings of the 2015 International Joint Conference on Neural Networks, 2015
2014
ExpTreeDB: Web-based query and visualization of manually annotated gene expression profiling experiments of human and mouse from GEO.
Bioinform., 2014
Proceedings of the 7th International Conference on Biomedical Engineering and Informatics, 2014
2013
Exploring the role of human miRNAs in virus-host interactions using systematic overlap analysis.
Bioinform., 2013
2011
Characterization the regulation of herpesvirus miRNAs from the view of human protein interaction network.
BMC Syst. Biol., 2011
Topology aware functional similarity of protein interaction networks based on gene ontology.
Proceedings of the 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2011
2010
GOSemSim: an R package for measuring semantic similarity among GO terms and gene products.
Bioinform., 2010
PerturbationAnalyzer: a tool for investigating the effects of concentration perturbation on protein interaction networks.
Bioinform., 2010
2009
BMC Bioinform., 2009
Proceedings of the International Joint Conferences on Bioinformatics, 2009
Proceedings of the International Joint Conferences on Bioinformatics, 2009
Proceedings of the 2nd International Conference on BioMedical Engineering and Informatics, 2009
2008
BMC Bioinform., 2008
2007
2006
Nucleic Acids Res., 2006
Selection of antisense oligonucleotides based on multiple predicted target mRNA structures.
BMC Bioinform., 2006
2005
TargetFinder: a software for antisense oligonucleotide target site selection based on MAST and secondary structures of target mRNA.
Bioinform., 2005
2001
Proceedings of the Advances in Multimedia Information Processing, 2001
Evaluation of the Image Degradation for a Typical Watermarking Algorithm in the Block-DCT Domain.
Proceedings of the Information and Communications Security, Third International Conference, 2001