Hongde Liu

According to our database, Hongde Liu authored at least 16 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

FaiMA: Feature-aware In-context Learning for Multi-domain Aspect-based Sentiment Analysis.

Songhua Yang, Xinke Jiang, Hanjie Zhao, Wenxuan Zeng, Hongde Liu, Yuxiang Jia

CoRR, 2024

2023

scAnno: a deconvolution strategy-based automatic cell type annotation tool for single-cell RNA-sequencing data sets.

Hongjia Liu, Huamei Li, Amit Sharma, Wenjuan Huang, Duo Pan, Yu Gu, Lu Lin, Xiao Sun, Hongde Liu

Briefings Bioinform., May, 2023

2022

Predicting hormone receptors and PAM50 subtypes of breast cancer from multi-scale lesion images of DCE-MRI with transfer learning technique.

Wenlong Ming, Fuyu Li, Yanhui Zhu, Yunfei Bai, Wanjun Gu, Yun Liu, Xiao Sun, Xiaoan Liu, Hongde Liu

Comput. Biol. Medicine, 2022

2021

DeepSSV: detecting somatic small variants in paired tumor and normal sequencing data with convolutional neural network.

Jing Meng, Brandon Victor, Zhen He, Hongde Liu, Taijiao Jiang

Briefings Bioinform., 2021

2019

DNMHMM: An approach to identify the differential nucleosome regions in multiple cell types based on a Hidden Markov Model.

Jiahao Xie, Yiran Cai, Huamei Li, Jiahui Wu, Xinlei Zhao, Kun Luo, Amit Sharma, Jianming Xie, Xiao Sun, Hongde Liu

Biosyst., 2019

2018

Nucleosome Positioning of Intronless Genes in the Human Genome.

Xiangfei Cheng, Yue Hou, Yumin Nie, Yiru Zhang, Huan Huang, Hongde Liu, Xiao Sun

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

2017

Histone modifications influence skipped exons inclusion.

Yue Hou, Huan Huang, Wenqiao Hu, Hongde Liu, Xiao Sun

J. Bioinform. Comput. Biol., 2017

2012

Sequence-Based Prediction of DNA-Binding Residues in Proteins with Conservation and Correlation Information.

Xin Ma, Jing Guo, Hongde Liu, Jianming Xie, Xiao Sun

IEEE ACM Trans. Comput. Biol. Bioinform., 2012

Nucleosome organization in sequences of alternative events in human genome.

Huan Huang, Shuangxin Yu, Hongde Liu, Xiao Sun

Biosyst., 2012

Next-generation sequencing data processing: Analysis of unmapped reads and extremely high mapped peaks.

Jiao Chen, ZuoLei Dai, Chang-Chang Cao, Qianqian Zhang, Hongde Liu, Xiao Sun

Proceedings of the 5th International Conference on BioMedical Engineering and Informatics, 2012

2011

Role of 10-11 bp periodicities of eukaryotic DNA sequence in nucleosome positioning.

Hongde Liu, Shuhai Lin, Zongwei Cai, Xiao Sun

Biosyst., 2011

2010

Nucleosomes Are Well Positioned at Both Ends of Exons.

Hongde Liu, Xiao Sun

Proceedings of the Life System Modeling and Intelligent Computing, 2010

2009

Prediction of DNA-binding residues in proteins from amino acid sequences using a random forest model with a hybrid feature.

Jiansheng Wu, Hongde Liu, Xueye Duan, Yan Ding, Hongtao Wu, Yunfei Bai, Xiao Sun

Bioinform., 2009

SVM-Based Approach for Predicting DNA-Binding Residues in Proteins from Amino Acid Sequences.

Xin Ma, Jiansheng Wu, Hongde Liu, Xinan Yang, Jianming Xie, Xiao Sun

Proceedings of the International Joint Conferences on Bioinformatics, 2009

2007

Support Vector Machine for Prediction of DNA-Binding Domains in Protein-DNA Complexes.

Jiansheng Wu, Hongtao Wu, Hongde Liu, Haoyan Zhou, Xiao Sun

Proceedings of the Life System Modeling and Simulation, International Conference, 2007

2004

Maximum Spectrum of Continuous Wavelet Transform and Its Application in Resolving an Overlapped Signal.

Xiaoquan Lu, Hongde Liu, Zhonghua Xue, Zhang Qiang

J. Chem. Inf. Model., 2004