Hongyu Zheng

According to our database, Hongyu Zheng authored at least 8 papers between 2020 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Creating and Using Minimizer Sketches in Computational Genomics.

Hongyu Zheng, Guillaume Marçais, Carl Kingsford

J. Comput. Biol., December, 2023

2022

Deriving Ranges of Optimal Estimated Transcript Expression due to Nonidentifiability.

Hongyu Zheng, Cong Ma, Carl Kingsford

J. Comput. Biol., 2022

Differentiable Learning of Sequence-Specific Minimizer Schemes with DeepMinimizer.

Minh Hoang, Hongyu Zheng, Carl Kingsford

J. Comput. Biol., 2022

DeepMinimizer: A Differentiable Framework for Optimizing Sequence-Specific Minimizer Schemes.

Minh Hoang, Hongyu Zheng, Carl Kingsford

Proceedings of the Research in Computational Molecular Biology, 2022

2021

Lower Density Selection Schemes via Small Universal Hitting Sets with Short Remaining Path Length.

Hongyu Zheng, Carl Kingsford, Guillaume Marçais

J. Comput. Biol., 2021

Sequence-specific minimizers via polar sets.

Hongyu Zheng, Carl Kingsford, Guillaume Marçais

Bioinform., 2021

Exact transcript quantification over splice graphs.

Cong Ma, Hongyu Zheng, Carl Kingsford

Algorithms Mol. Biol., 2021

2020

Improved design and analysis of practical minimizers.

Hongyu Zheng, Carl Kingsford, Guillaume Marçais

Bioinform., 2020