Jay W. Ponder
Orcid: 0000-0001-5450-9230
According to our database1,
Jay W. Ponder
authored at least 14 papers
between 1995 and 2023.
Collaborative distances:
Collaborative distances:
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Bibliography
2023
J. Chem. Inf. Model., May, 2023
2021
J. Comput. Aided Mol. Des., 2021
2020
Tinker-HP : Accelerating Molecular Dynamics Simulations of Large Complex Systems with Advanced Point Dipole Polarizable Force Fields using GPUs and Multi-GPUs systems.
CoRR, 2020
2019
Raising the Performance of the Tinker-HP Molecular Modeling Package on Intel's HPC Architectures: a Living Review [Article v1.0].
CoRR, 2019
2018
Absolute binding free energies for the SAMPL6 cucurbit[8]uril host-guest challenge via the AMOEBA polarizable force field.
J. Comput. Aided Mol. Des., 2018
2017
J. Comput. Chem., 2017
2016
Scalable improvement of SPME multipolar electrostatics in anisotropic polarizable molecular mechanics using a general short-range penetration correction up to quadrupoles.
J. Comput. Chem., 2016
Blind prediction of distribution in the SAMPL5 challenge with QM based protomer and p<i>K</i> <sub>a</sub> corrections.
J. Comput. Aided Mol. Des., 2016
2013
A valence bond model for aqueous Cu(II) and Zn(II) ions in the AMOEBA polarizable force field.
J. Comput. Chem., 2013
2011
J. Comput. Chem., 2011
2002
Consistent treatment of inter- and intramolecular polarization in molecular mechanics calculations.
J. Comput. Chem., 2002
2000
J. Comput. Chem., 2000
1998
Protein structure prediction using a combination of sequence homology and global energy minimization: II. Energy functions.
J. Comput. Chem., 1998
1995
J. Comput. Chem., 1995