John R. Yates III

According to our database, John R. Yates III authored at least 11 papers between 1998 and 2015.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2015

Curation of the Mammalian Palmitoylome Indicates a Pivotal Role for Palmitoylation in Diseases and Disorders of the Nervous System and Cancers.

Shaun S. Sanders, Dale D. O. Martin, Stefanie L. Butland, Mathieu Lavallée-Adam, Diego Calzolari, Chris Kay, John R. Yates III, Michael R. Hayden

PLoS Comput. Biol., 2015

2014

Census 2: isobaric labeling data analysis.

Sung Kyu Robin Park, Aaron Aslanian, Daniel B. McClatchy, Xuemei Han, Harshil Shah, Meha Singh, Navin Rauniyar, James J. Moresco, Antonio F. M. Pinto, Jolene K. Diedrich, Claire Delahunty, John R. Yates III

Bioinform., 2014

2012

Improving the TFold test for differential shotgun proteomics.

Paulo C. Carvalho, John R. Yates III, Valmir Carneiro Barbosa

Bioinform., 2012

2011

Analyzing marginal cases in differential shotgun proteomics.

Paulo C. Carvalho, Juliana S. G. Fischer, Jonas Perales, John R. Yates III, Valmir Carneiro Barbosa, Elias Bareinboim

Bioinform., 2011

Constrained De Novo Sequencing of Peptides with Application to Conotoxins.

Swapnil Bhatia, Yong J. Kil, Beatrix Ueberheide, Brian T. Chait, Lemmuel Lara Tayo, Lourdes J. Cruz, Bingwen Lu, John R. Yates III, Marshall W. Bern

Proceedings of the Research in Computational Molecular Biology, 2011

2010

XDIA: improving on the label-free data-independent analysis.

Paulo C. Carvalho, Xuemei Han, Tao Xu, Daniel Cociorva, Maria da Gloria Carvalho, Valmir Carneiro Barbosa, John R. Yates III

Bioinform., 2010

2009

YADA: a tool for taking the most out of high-resolution spectra.

Paulo C. Carvalho, Tao Xu, Xuemei Han, Daniel Cociorva, Valmir Carneiro Barbosa, John R. Yates III

Bioinform., 2009

2008

PatternLab for proteomics: a tool for differential shotgun proteomics.

Paulo C. Carvalho, Juliana S. G. Fischer, Emily I. Chen, John R. Yates III, Valmir Carneiro Barbosa

BMC Bioinform., 2008

2004

CEBS object model for systems biology data, SysBio-OM.

Sandhya Xirasagar, Scott F. Gustafson, B. Alex Merrick, Kenneth B. Tomer, Stanley Stasiewicz, Denny D. Chan, Kenneth J. Yost III, John R. Yates III, Susan Sumner, Nianqing Xiao, Michael D. Waters

Bioinform., 2004

Automatic Quality Assessment of Peptide Tandem Mass Spectra.

Marshall W. Bern, David Goldberg, W. Hayes McDonald, John R. Yates III

Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004

1998

Mass spectrometry and the proteome (abstract).

John R. Yates III

Proceedings of the Second Annual International Conference on Research in Computational Molecular Biology, 1998