Jonathan S. Mason

According to our database, Jonathan S. Mason authored at least 14 papers between 1996 and 2020.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2020

Accurate Prediction of GPCR Ligand Binding Affinity with Free Energy Perturbation.

Francesca Deflorian, Laura Pérez-Benito, Eelke B. Lenselink, Miles Congreve, Herman W. T. van Vlijmen, Jonathan S. Mason, Chris de Graaf, Gary Tresadern

J. Chem. Inf. Model., 2020

2019

Understanding Ligand Binding Selectivity in a Prototypical GPCR Family.

Giulio Mattedi, Francesca Deflorian, Jonathan S. Mason, Chris de Graaf, Francesco L. Gervasio

J. Chem. Inf. Model., 2019

2016

GPCR-Bench: A Benchmarking Set and Practitioners' Guide for G Protein-Coupled Receptor Docking.

Dahlia R. Weiss, Andrea Bortolato, Benjamin G. Tehan, Jonathan S. Mason

J. Chem. Inf. Model., 2016

2015

Decoding the Role of Water Dynamics in Ligand-Protein Unbinding: CRF₁R as a Test Case.

Andrea Bortolato, Francesca Deflorian, Dahlia R. Weiss, Jonathan S. Mason

J. Chem. Inf. Model., 2015

2013

Water Network Perturbation in Ligand Binding: Adenosine A_2A Antagonists as a Case Study.

Andrea Bortolato, Benjamin G. Tehan, Michael S. Bodnarchuk, Jonathan W. Essex, Jonathan S. Mason

J. Chem. Inf. Model., 2013

2010

High-Throughput Virtual Screening of Proteins Using GRID Molecular Interaction Fields.

Simone Sciabola, Robert V. Stanton, James E. J. Mills, Maria M. Flocco, Massimo Baroni, Gabriele Cruciani, Francesca Perruccio, Jonathan S. Mason

J. Chem. Inf. Model., 2010

2007

Designing Compound Subsets: Comparison of Random and Rational Approaches Using Statistical Simulation.

Siew K. Yeap, Rosalind J. Walley, Michael Snarey, Willem P. van Hoorn, Jonathan S. Mason

J. Chem. Inf. Model., 2007

A Common Reference Framework for Analyzing/Comparing Proteins and Ligands. Fingerprints for Ligands And Proteins (FLAP): Theory and Application.

Massimo Baroni, Gabriele Cruciani, Simone Sciabola, Francesca Perruccio, Jonathan S. Mason

J. Chem. Inf. Model., 2007

2004

Descriptors you can count on? Normalized and filtered pharmacophore descriptors for virtual screening.

Andrew C. Good, Sung-Jin Cho, Jonathan S. Mason

J. Comput. Aided Mol. Des., 2004

1999

Ligand-Receptor 3-D Similarity Studies Using Multiple 4-Point Pharmacophores.

Jonathan S. Mason, Daniel L. Cheney

Proceedings of the 4th Pacific Symposium on Biocomputing, 1999

1998

Chemistry Space Metrics in Diversity Analysis, Library Design, and Compound Selection.

Paul R. Menard, Jonathan S. Mason, Isabelle Morize, Susanne Bauerschmidt

J. Chem. Inf. Comput. Sci., 1998

Rational Screening Set Design and Compound Selection: Cascaded Clustering.

Paul R. Menard, Richard A. Lewis, Jonathan S. Mason

J. Chem. Inf. Comput. Sci., 1998

1997

Similarity Measures for Rational Set Selection and Analysis of Combinatorial Libraries: The Diverse Property-Derived (DPD) Approach.

Richard A. Lewis, Jonathan S. Mason, Iain M. McLay

J. Chem. Inf. Comput. Sci., 1997

1996

Diversity Profiling and Design Using 3D Pharmacophores: Pharmacophore-Derived Queries (PDQ).

Stephen D. Pickett, Jonathan S. Mason, Iain M. McLay

J. Chem. Inf. Comput. Sci., 1996