Junbo Duan

According to our database1, Junbo Duan authored at least 29 papers between 2011 and 2021.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2021
CNV_IFTV: An Isolation Forest and Total Variation-Based Detection of CNVs from Short-Read Sequencing Data.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021

2020
SVSR: A Program to Simulate Structural Variations and Generate Sequencing Reads for Multiple Platforms.
IEEE ACM Trans. Comput. Biol. Bioinform., 2020

CONDEL: Detecting Copy Number Variation and Genotyping Deletion Zygosity from Single Tumor Samples Using Sequence Data.
IEEE ACM Trans. Comput. Biol. Bioinform., 2020

Comparative study of whole exome sequencing-based copy number variation detection tools.
BMC Bioinform., 2020

CRSCNV: A Cross-Model-Based Statistical Approach to Detect Copy Number Variations in Sequence Data.
IEEE Access, 2020

2019
A Joint Least Squares and Least Absolute Deviation Model.
IEEE Signal Process. Lett., 2019

A Parallelizable Framework for Segmenting Piecewise Signals.
IEEE Access, 2019

2016
A Sparse Model Based Detection of Copy Number Variations From Exome Sequencing Data.
IEEE Trans. Biomed. Eng., 2016

Generalized LASSO with under-determined regularization matrices.
Signal Process., 2016

2015
Homotopy Based Algorithms for ℓ<sub>0</sub>-Regularized Least-Squares.
IEEE Trans. Signal Process., 2015

An optimal method to segment piecewise poisson distributed signals with application to sequencing data.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

2014
Common Copy Number Variation Detection From Multiple Sequenced Samples.
IEEE Trans. Biomed. Eng., 2014

Sparse representation based biomarker selection for schizophrenia with integrated analysis of fMRI and SNPs.
NeuroImage, 2014

Population clustering based on copy number variations detected from next generation sequencing data.
J. Bioinform. Comput. Biol., 2014

ℓ<sub>2</sub>-ℓ<sub>0</sub> regularization path tracking algorithms.
CoRR, 2014

2013
Subtyping glioblastoma by combining miRNA and mRNA expression data using compressed sensing-based approach.
EURASIP J. Bioinform. Syst. Biol., 2013

CNV-TV: A robust method to discover copy number variation from short sequencing reads.
BMC Bioinform., 2013

Sparse representation based biomarker selection for schizophrenia with integrated analysis of fMRI and SNP data.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

Modeling exome sequencing data with generalized Gaussian distribution with application to copy number variation detection.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012
On LARS/Homotopy Equivalence Conditions for Over-Determined LASSO.
IEEE Signal Process. Lett., 2012

Sparse Representation Based Clustering for Integrated Analysis of Gene Copy Number Variation and Gene Expression Date.
Int. J. Comput. Their Appl., 2012

Detection of common copy number variation with application to population clustering from next generation sequencing data.
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012

Bio marker identification for diagnosis of schizophrenia with integrated analysis of fMRI and SNPs.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

Copy number variation estimation from multiple next-generation sequencing samples.
Proceedings of the ACM International Conference on Bioinformatics, 2012

2011
From Bernoulli-Gaussian Deconvolution to Sparse Signal Restoration.
IEEE Trans. Signal Process., 2011

A Compressed Sensing Based Approach for Subtyping of Leukemia from gene Expression Data.
J. Bioinform. Comput. Biol., 2011

A sufficient condition on monotonic increase of the number of nonzero entry in the optimizer of L1 norm penalized least-square problem.
CoRR, 2011

Classifying six glioma subtypes from combined gene expression and CNVs data based on compressive sensing approach.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

Detection of copy number variation from next generation sequencing data with total variation penalized least square optimization.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011


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