Katsuyuki Yugi

According to our database, Katsuyuki Yugi authored at least 7 papers between 1999 and 2010.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2010

Operon structure optimization by random self-assembly.

Yusuke Nakagawa, Katsuyuki Yugi, Kenji Tsuge, Mitsuhiro Itaya, Hiroshi Yanagawa, Yasubumi Sakakibara

Nat. Comput., 2010

2007

Implementing in vivo Cellular Automata using Toggle Switch and Inter-Bacteria Communication Mechanism.

Yasubumi Sakakibara, Hirotaka Nakagawa, Yusaku Nakashima, Katsuyuki Yugi

Proceedings of the 2nd International ICST Conference on Bio-Inspired Models of Network, 2007

2005

A microarray data-based semi-kinetic method for predicting quantitative dynamics of genetic networks.

Katsuyuki Yugi, Yoichi Nakayama, Shigen Kojima, Tomoya Kitayama, Masaru Tomita

BMC Bioinform., 2005

2004

A general computational model of mitochondrial metabolism in a whole organelle scale.

Katsuyuki Yugi, Masaru Tomita

Bioinform., 2004

2002

Computational Challenges in Cell Simulation: A Software Engineering Approach.

Kouichi Takahashi, Katsuyuki Yugi, Kenta Hashimoto, Yohei Yamada, Christopher J. F. Pickett, Masaru Tomita

IEEE Intell. Syst., 2002

2000

The E-CELL project: towards integrative simulation of cellular processes.

Masaru Tomita, Kenta Hashimoto, Koichi Takahashi, Yuri Matsuzaki, Ryo Matsushima, Katsuyuki Yugi, Fumihiko Miyoshi, Hisako Nakano, Yusuke Saito, Tom Shimizu, Yoichi Nakayama

Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, 2000

1999

E-CELL: software environment for whole-cell simulation.

Masaru Tomita, Kenta Hashimoto, Koichi Takahashi, Thomas Simon Shimizu, Yuri Matsuzaki, Fumihiko Miyoshi, Kanako Saito, Sakura Tanida, Katsuyuki Yugi, J. Craig Venter, Clyde A. Hutchison III

Bioinform., 1999