Kees Joost Batenburg

Orcid: 0000-0002-3154-8576

Affiliations:
  • Centrum Wiskunde & Informatica (CWI), Amsterdam, The Netherland


According to our database1, Kees Joost Batenburg authored at least 118 papers between 2003 and 2024.

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Bibliography

2024
Reducing Manual Annotation Costs for Cell Segmentation by Upgrading Low-Quality Annotations.
J. Imaging, July, 2024

Single-Shot Tomography of Discrete Dynamic Objects.
IEEE Trans. Computational Imaging, 2024

Learned denoising with simulated and experimental low-dose CT data.
CoRR, 2024

Implicit Neural Representations for Robust Joint Sparse-View CT Reconstruction.
CoRR, 2024

2023
Benchmarking Optimization Algorithms for Auto-Tuning GPU Kernels.
IEEE Trans. Evol. Comput., 2023

Inside out: Fusing 3D imaging modalities for the internal and external investigation of multi-material museum objects.
Digit. Appl. Archaeol. Cult. Heritage, 2023

Multi-stage Deep Learning Artifact Reduction for Computed Tomography.
CoRR, 2023

2DeteCT - A large 2D expandable, trainable, experimental Computed Tomography dataset for machine learning.
CoRR, 2023

Quantifying the effect of X-ray scattering for data generation in real-time defect detection.
CoRR, 2023

Real-Time Tilt Undersampling Optimization during Electron Tomography of Beam Sensitive Samples using Golden Ratio Scanning and RECAST3D.
CoRR, 2023

SR4ZCT: Self-supervised Through-Plane Resolution Enhancement for CT Images with Arbitrary Resolution and Overlap.
Proceedings of the Machine Learning in Medical Imaging - 14th International Workshop, 2023

2022
TOP-CT: Trajectory With Overlapping Projections X-Ray Computed Tomography.
IEEE Trans. Computational Imaging, 2022

SparseAlign: A Grid-Free Algorithm for Automatic Marker Localization and Deformation Estimation in Cryo-Electron Tomography.
IEEE Trans. Computational Imaging, 2022

A tomographic workflow to enable deep learning for X-ray based foreign object detection.
Expert Syst. Appl., 2022

Optimally Weighted Ensembles of Regression Models: Exact Weight Optimization and Applications.
CoRR, 2022

SparseAlign: A Super-Resolution Algorithm for Automatic Marker Localization and Deformation Estimation in Cryo-Electron Tomography.
CoRR, 2022

Going green: optimizing GPUs for energy efficiency through model-steered auto-tuning.
Proceedings of the IEEE/ACM International Workshop on Performance Modeling, 2022

An Analysis of the Impact of Annotation Errors on the Accuracy of Deep Learning for Cell Segmentation.
Proceedings of the International Conference on Medical Imaging with Deep Learning, 2022

2021
Noise2Filter: fast, self-supervised learning and real-time reconstruction for 3D computed tomography.
Mach. Learn. Sci. Technol., 2021

The Study of Three-Dimensional Fingerprint Recognition in Cultural Heritage: Trends and Challenges.
ACM Journal on Computing and Cultural Heritage, 2021

Quantitative Comparison of Deep Learning-Based Image Reconstruction Methods for Low-Dose and Sparse-Angle CT Applications.
J. Imaging, 2021

Unsupervised Foreign Object Detection Based on Dual-Energy Absorptiometry in the Food Industry.
J. Imaging, 2021

ADJUST: A Dictionary-Based Joint Reconstruction and Unmixing Method for Spectral Tomography.
CoRR, 2021

Improving reproducibility in synchrotron tomography using implementation-adapted filters.
CoRR, 2021

Comparison of convolutional neural network training strategies for cone-beam CT image segmentation.
Comput. Methods Programs Biomed., 2021

3D deformable registration of longitudinal abdominopelvic CT images using unsupervised deep learning.
Comput. Methods Programs Biomed., 2021

2020
Automated FDK-Filter Selection for Cone-Beam CT in Research Environments.
IEEE Trans. Computational Imaging, 2020

Noise2Inverse: Self-Supervised Deep Convolutional Denoising for Tomography.
IEEE Trans. Computational Imaging, 2020

Prototyping X-ray tomographic reconstruction pipelines with FleXbox.
SoftwareX, 2020

Task-Driven Learned Hyperspectral Data Reduction Using End-to-End Supervised Deep Learning.
J. Imaging, 2020

Emulation of X-ray Light-Field Cameras.
J. Imaging, 2020

A Computationally Efficient Reconstruction Algorithm for Circular Cone-Beam Computed Tomography Using Shallow Neural Networks.
J. Imaging, 2020

Explorative Imaging and Its Implementation at the FleX-ray Laboratory.
J. Imaging, 2020

An Efficient Interpolation Approach for Exploring the Parameter Space of Regularized Tomography Algorithms.
Fundam. Informaticae, 2020

Parallel-beam X-ray CT datasets of apples with internal defects and label balancing for machine learning.
CoRR, 2020

CoShaRP: A Convex Program for Single-shot Tomographic Shape Sensing.
CoRR, 2020

LEAN: graph-based pruning for convolutional neural networks by extracting longest chains.
CoRR, 2020

Deep data compression for approximate ultrasonic image formation.
CoRR, 2020

Fast ultrasonic imaging using end-to-end deep learning.
CoRR, 2020

Noise2Inverse: Self-supervised deep convolutional denoising for linear inverse problems in imaging.
CoRR, 2020

A projection-based data partitioning method for distributed tomographic reconstruction.
Proceedings of the 2020 SIAM Conference on Parallel Processing for Scientific Computing, 2020

Real-time segmentation for tomographic imaging.
Proceedings of the 30th IEEE International Workshop on Machine Learning for Signal Processing, 2020

Atomic Super-Resolution Tomography.
Proceedings of the Combinatorial Image Analysis - 20th International Workshop, 2020

2019
A geometric partitioning method for distributed tomographic reconstruction.
Parallel Comput., 2019

A Cone-Beam X-Ray CT Data Collection Designed for Machine Learning.
CoRR, 2019

2018
Improving Tomographic Reconstruction from Limited Data Using Mixed-Scale Dense Convolutional Neural Networks.
J. Imaging, 2018

A Data Consistent Variational Segmentation Approach Suitable for Real-time Tomography.
Fundam. Informaticae, 2018

Computational 3D X-ray Imaging for the Food Industry.
ERCIM News, 2018

A Multi-channel DART Algorithm.
Proceedings of the Combinatorial Image Analysis - 19th International Workshop, 2018

2017
A Novel Tomographic Reconstruction Method Based on the Robust Student's t Function For Suppressing Data Outliers.
IEEE Trans. Computational Imaging, 2017

Computational Imaging - Introduction to the Special Theme.
ERCIM News, 2017

High-Level Algorithm Prototyping: An Example Extending the TVR-DART Algorithm.
Proceedings of the Discrete Geometry for Computer Imagery, 2017

A Parametric Level-Set Method for Partially Discrete Tomography.
Proceedings of the Discrete Geometry for Computer Imagery, 2017

2016
TVR-DART: A More Robust Algorithm for Discrete Tomography From Limited Projection Data With Automated Gray Value Estimation.
IEEE Trans. Image Process., 2016

Easy implementation of advanced tomography algorithms using the ASTRA toolbox with Spot operators.
Numer. Algorithms, 2016

An Orientation-space Super Sampling Technique for Six-dimensional Diffraction Contrast Tomography.
Fundam. Informaticae, 2016

A method for locally approximating regularized iterative tomographic reconstruction methods.
CoRR, 2016

Mobile Radio Tomography: Agent-Based Imaging.
Proceedings of the BNAIC 2016: Artificial Intelligence, 2016

2015
An Iterative CT Reconstruction Algorithm for Fast Fluid Flow Imaging.
IEEE Trans. Image Process., 2015

Algebraic filter approach for fast approximation of nonlinear tomographic reconstruction methods.
J. Electronic Imaging, 2015

Quality bounds for binary tomography with arbitrary projection matrices.
Discret. Appl. Math., 2015

Filtered backprojection using algebraic filters; application to biomedical micro-CT data.
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

Region based 4D tomographic image reconstruction: Application to cardiac x-ray CT.
Proceedings of the 2015 IEEE International Conference on Image Processing, 2015

2014
Improving Filtered Backprojection Reconstruction by Data-Dependent Filtering.
IEEE Trans. Image Process., 2014

Region-Based Iterative Reconstruction of Structurally Changing Objects in CT.
IEEE Trans. Image Process., 2014

Super-Resolution for Computed Tomography Based on Discrete Tomography.
IEEE Trans. Image Process., 2014

Approximating Algebraic Tomography Methods by Filtered Backprojection: A Local Filter Approach.
Fundam. Informaticae, 2014

Aligning Projection Images from Binary Volumes.
Fundam. Informaticae, 2014

The reconstructed residual error: A novel segmentation evaluation measure for reconstructed images in tomography.
Comput. Vis. Image Underst., 2014

SDART: An algorithm for discrete tomography from noisy projections.
Comput. Vis. Image Underst., 2014

Adaptive Grid Refinement for Discrete Tomography.
Proceedings of the Discrete Geometry for Computer Imagery, 2014

2013
Fast Tomographic Reconstruction From Limited Data Using Artificial Neural Networks.
IEEE Trans. Image Process., 2013

Discrete algebraic reconstruction technique: a new approach for superresolution reconstruction of license plates.
J. Electronic Imaging, 2013

Discrete Tomography in MRI: a Simulation Study.
Fundam. Informaticae, 2013

Approximate Discrete Reconstruction Algorithm.
Fundam. Informaticae, 2013

Bounds on the quality of reconstructed images in binary tomography.
Discret. Appl. Math., 2013

Dynamic angle selection in binary tomography.
Comput. Vis. Image Underst., 2013

Automatic Optimization of Alignment Parameters for Tomography Datasets.
Proceedings of the Image Analysis, 18th Scandinavian Conference, 2013

Discrete representation of local orientation in grains using diffraction contrast tomography.
Proceedings of the 8th International Symposium on Image and Signal Processing and Analysis, 2013

A Method for Feature Detection in Binary Tomography.
Proceedings of the Discrete Geometry for Computer Imagery, 2013

2012
Fast Approximation of Algebraic Reconstruction Methods for Tomography.
IEEE Trans. Image Process., 2012

Automatic Parameter Estimation for the Discrete Algebraic Reconstruction Technique (DART).
IEEE Trans. Image Process., 2012

On the Difficulty of Nonograms.
J. Int. Comput. Games Assoc., 2012

A Central Reconstruction Based Strategy for Selecting Projection Angles in Binary Tomography.
Proceedings of the Image Analysis and Recognition - 9th International Conference, 2012

Combined Motion Estimation and Reconstruction in Tomography.
Proceedings of the Computer Vision - ECCV 2012. Workshops and Demonstrations, 2012

2011
Optimal Threshold Selection for Segmentation of Dense Homogeneous Objects in Tomographic Reconstructions.
IEEE Trans. Medical Imaging, 2011

DART: A Practical Reconstruction Algorithm for Discrete Tomography.
IEEE Trans. Image Process., 2011

A semi-automatic algorithm for grey level estimation in tomography.
Pattern Recognit. Lett., 2011

Three-Dimensional Reconstruction of a Nanoparticle at Atomic Resolution.
ERCIM News, 2011

Bounds on the Difference between Reconstructions in Binary Tomography.
Proceedings of the Discrete Geometry for Computer Imagery, 2011

Error Bounds on the Reconstruction of Binary Images from Low Resolution Scans.
Proceedings of the Computer Analysis of Images and Patterns, 2011

2010
An Algebraic Framework for Discrete Tomography: Revealing the Structure of Dependencies.
SIAM J. Discret. Math., 2010

A discrete tomography approach for superresolution micro-CT images: application to bone.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

2009
Optimal Threshold Selection for Tomogram Segmentation by Projection Distance Minimization.
IEEE Trans. Medical Imaging, 2009

Adaptive thresholding of tomograms by projection distance minimization.
Pattern Recognit., 2009

Solving Nonograms by combining relaxations.
Pattern Recognit., 2009

Generic iterative subset algorithms for discrete tomography.
Discret. Appl. Math., 2009

Experiences with Cell-BE and GPU for Tomography.
Proceedings of the Embedded Computer Systems: Architectures, 2009

Grey Level Estimation for Discrete Tomography.
Proceedings of the Discrete Geometry for Computer Imagery, 2009

2008
In Memoriam Attila Kuba (1953-2006).
Theor. Comput. Sci., 2008

Preface.
Theor. Comput. Sci., 2008

A Network Flow Algorithm for Reconstructing Binary Images from Continuous X-rays.
J. Math. Imaging Vis., 2008

Fast bias field reduction by localized Lloyd-Max quantization.
Proceedings of the Medical Imaging 2008: Image Processing, 2008

A Reasoning Framework for Solving Nonograms.
Proceedings of the Combinatorial Image Analysis, 12th International Workshop, 2008

Threshold Selection for Segmentation of Dense Objects in Tomograms.
Proceedings of the Advances in Visual Computing, 4th International Symposium, 2008

Selection of Local Thresholds for Tomogram Segmentation by Projection Distance Minimization.
Proceedings of the Discrete Geometry for Computer Imagery, 2008

2007
A Network Flow Algorithm for Reconstructing Binary Images from Discrete X-rays.
J. Math. Imaging Vis., 2007

Automatic multiple threshold scheme for segmentation of tomograms.
Proceedings of the Medical Imaging 2007: Image Processing, 2007

Dart: A Fast Heuristic Algebraic Reconstruction Algorithm for Discrete Tomography.
Proceedings of the International Conference on Image Processing, 2007

Optimal Threshold Selection for Tomogram Segmentation by Reprojection of the Reconstructed Image.
Proceedings of the Computer Analysis of Images and Patterns, 12th International Conference, 2007

2006
A Neural Network Approach to Real-Time Discrete Tomography.
Proceedings of the Combinatorial Image Analysis, 11th International Workshop, 2006

A Learning Classifier Approach to Tomography.
Proceedings of the ECAI 2006, 17th European Conference on Artificial Intelligence, August 29, 2006

A Network Flow Algorithm for Binary Image Reconstruction from Few Projections.
Proceedings of the Discrete Geometry for Computer Imagery, 13th International Conference, 2006

2005
A new algorithm for 3D binary tomography.
Electron. Notes Discret. Math., 2005

An evolutionary algorithm for discrete tomography.
Discret. Appl. Math., 2005

Neural Networks for Discrete Tomography.
Proceedings of the BNAIC 2005, 2005

2004
On the Reconstruction of Crystals Through Discrete Tomography.
Proceedings of the Combinatorial Image Analysis, 10th InternationalWorkshop, 2004

2003
Analysis and optimization of an algorithm for discrete tomography.
Electron. Notes Discret. Math., 2003


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