Ko Abe

According to our database, Ko Abe authored at least 8 papers between 2018 and 2026.

Collaborative distances:

• Dijkstra number of six.
• Erdős number of five.

2026

scSurv: a deep generative model for single-cell survival analysis.

Chikara Mizukoshi, Yasuhiro Kojima, Shuto Hayashi, Ko Abe, Daisuke Kasugai, Teppei Shimamura

Bioinform., 2026

2024

LineageVAE: reconstructing historical cell states and transcriptomes toward unobserved progenitors.

Koichiro Majima, Yasuhiro Kojima, Kodai Minoura, Ko Abe, Haruka Hirose, Teppei Shimamura

Bioinform., 2024

2023

UNMF: a unified nonnegative matrix factorization for multi-dimensional omics data.

Ko Abe, Teppei Shimamura

Briefings Bioinform., September, 2023

2021

CYBERTRACK2.0: zero-inflated model-based cell clustering and population tracking method for longitudinal mass cytometry data.

Kodai Minoura, Ko Abe, Yuka Maeda, Hiroyoshi Nishikawa, Teppei Shimamura

Bioinform., 2021

2020

Model-based clustering for flow and mass cytometry data with clinical information.

Ko Abe, Kodai Minoura, Yuka Maeda, Hiroyoshi Nishikawa, Teppei Shimamura

BMC Bioinform., 2020

2019

ENIGMA: an enterotype-like unigram mixture model for microbial association analysis.

Ko Abe, Masaaki Hirayama, Kinji Ohno, Teppei Shimamura

BMC Genom., 2019

Model-based cell clustering and population tracking for time-series flow cytometry data.

Kodai Minoura, Ko Abe, Yuka Maeda, Hiroyoshi Nishikawa, Teppei Shimamura

BMC Bioinform., 2019

2018

A latent allocation model for the analysis of microbial composition and disease.

Ko Abe, Masaaki Hirayama, Kinji Ohno, Teppei Shimamura

BMC Bioinform., 2018