Mark Bathe

According to our database, Mark Bathe authored at least 9 papers between 2003 and 2025.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of four.

2025

DNA Origami Nanostructures Observed in Transmission Electron Microscopy Images can be Characterized through Convolutional Neural Networks.

Xingfei Wei, Qiankun Mo, Chi Chen, Mark Bathe, Rigoberto Hernandez

CoRR, March, 2025

Characterizing DNA Origami Nanostructures in TEM Images Using Convolutional Neural Networks.

Xingfei Wei, Qiankun Mo, Chi Chen, Mark Bathe, Rigoberto Hernandez

J. Chem. Inf. Model., 2025

2023

Factorization and pseudofactorization of weighted graphs.

Kristin Sheridan, Joseph Berleant, Mark Bathe, Anne Condon, Virginia Vassilevska Williams

Discret. Appl. Math., October, 2023

Isometric Hamming embeddings of weighted graphs.

Joseph Berleant, Kristin Sheridan, Anne Condon, Virginia Vassilevska Williams, Mark Bathe

Discret. Appl. Math., June, 2023

2019

DoGNet: A deep architecture for synapse detection in multiplexed fluorescence images.

Victor Kulikov, Syuan-Ming Guo, Matthew Stone, Allen Goodman, Anne E. Carpenter, Mark Bathe, Victor S. Lempitsky

PLoS Comput. Biol., 2019

A Bayesian framework for high-throughput T cell receptor pairing.

Patrick V. Holec, Joseph Berleant, Mark Bathe, Michael E. Birnbaum

Bioinform., 2019

2011

Conformational dynamics data bank: a database for conformational dynamics of proteins and supramolecular protein assemblies.

Do-Nyun Kim, Josiah Altschuler, Campbell Strong, Gaël McGill, Mark Bathe

Nucleic Acids Res., 2011

2010

The subspace iteration method in protein normal mode analysis.

Reza Sharifi Sedeh, Mark Bathe, Klaus-Jürgen Bathe

J. Comput. Chem., 2010

2003

Inverse Monte Carlo procedure for conformation determination of macromolecules.

Mark Bathe, Gregory C. Rutledge

J. Comput. Chem., 2003