Martin Vogt

Orcid: 0000-0002-3931-9516

Affiliations:
  • University of Bonn, LIMES Institute, Germany


According to our database1, Martin Vogt authored at least 42 papers between 2007 and 2021.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

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Links

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Bibliography

2021
Prediction of activity cliffs on the basis of images using convolutional neural networks.
J. Comput. Aided Mol. Des., 2021

2020
From Qualitative to Quantitative Analysis of Activity and Property Landscapes.
J. Chem. Inf. Model., 2020

Activity landscape image analysis using convolutional neural networks.
J. Cheminformatics, 2020

ccbmlib - a Python package for modeling Tanimoto similarity value distributions.
F1000Research, 2020

2019
Systematic computational identification of promiscuity cliff pathways formed by inhibitors of the human kinome.
J. Comput. Aided Mol. Des., 2019

2017
Influence of Varying Training Set Composition and Size on Support Vector Machine-Based Prediction of Active Compounds.
J. Chem. Inf. Model., 2017

Co-Regularised Support Vector Regression.
Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2017

2016
Design of chemical space networks on the basis of Tversky similarity.
J. Comput. Aided Mol. Des., 2016

Lessons learned from the design of chemical space networks and opportunities for new applications.
J. Comput. Aided Mol. Des., 2016

Maximum common substructure-based Tversky index: an asymmetric hybrid similarity measure.
J. Comput. Aided Mol. Des., 2016

Activity-relevant similarity values for fingerprints and implications for similarity searching.
F1000Research, 2016

Ligand-Based Virtual Screening with Co-regularised Support Vector Regression.
Proceedings of the IEEE International Conference on Data Mining Workshops, 2016

2015
Design and characterization of chemical space networks for different compound data sets.
J. Comput. Aided Mol. Des., 2015

Erratum to: Design of chemical space networks using a Tanimoto similarity variant based upon maximum common substructures.
J. Comput. Aided Mol. Des., 2015

Design of chemical space networks using a Tanimoto similarity variant based upon maximum common substructures.
J. Comput. Aided Mol. Des., 2015

Comparison of bioactive chemical space networks generated using substructure- and fingerprint-based measures of molecular similarity.
J. Comput. Aided Mol. Des., 2015

Introducing the 'active search' method for iterative virtual screening.
J. Comput. Aided Mol. Des., 2015

AnalogExplorer2 - Stereochemistry sensitive graphical analysis of large analog series.
F1000Research, 2015

2014
Large-Scale Assessment of Activity Landscape Feature Probabilities of Bioactive Compounds.
J. Chem. Inf. Model., 2014

Design of an activity landscape view taking compound-based feature probabilities into account.
J. Comput. Aided Mol. Des., 2014

2013
Conditional Probabilities of Activity Landscape Features for Individual Compounds.
J. Chem. Inf. Model., 2013

Similarity Searching for Potent Compounds Using Feature Selection.
J. Chem. Inf. Model., 2013

Searching for Closely Related Ligands with Different Mechanisms of Action Using Machine Learning and Mapping Algorithms.
J. Chem. Inf. Model., 2013

Predicting Potent Compounds via Model-Based Global Optimization.
J. Chem. Inf. Model., 2013

Statistical modeling of value distributions of similarity coefficients in virtual screening and its application to predicting fingerprint search performance.
J. Cheminformatics, 2013

Emerging Chemical Patterns - Theory and Applications.
Proceedings of the Contrast Data Mining: Concepts, Algorithms, and Applications, 2013

2012
Systematic Assessment of Compound Series with SAR Transfer Potential.
J. Chem. Inf. Model., 2012

Navigating High-Dimensional Activity Landscapes: Design and Application of the Ligand-Target Differentiation Map.
J. Chem. Inf. Model., 2012

MMP-Cliffs: Systematic Identification of Activity Cliffs on the Basis of Matched Molecular Pairs.
J. Chem. Inf. Model., 2012

2011
Correction to Identification of Descriptors Capturing Compound Class-Specific Features by Mutual Information Analysis.
J. Chem. Inf. Model., 2011

From Activity Cliffs to Activity Ridges: Informative Data Structures for SAR Analysis.
J. Chem. Inf. Model., 2011

Introduction of the Conditional Correlated Bernoulli Model of Similarity Value Distributions and its Application to the Prospective Prediction of Fingerprint Search Performance.
J. Chem. Inf. Model., 2011

Development of a Method To Consistently Quantify the Structural Distance between Scaffolds and To Assess Scaffold Hopping Potential.
J. Chem. Inf. Model., 2011

2010
Identification of Descriptors Capturing Compound Class-Specific Features by Mutual Information Analysis.
J. Chem. Inf. Model., 2010

Current Trends in Ligand-Based Virtual Screening: Molecular Representations, Data Mining Methods, New Application Areas, and Performance Evaluation.
J. Chem. Inf. Model., 2010

Design and Evaluation of Bonded Atom Pair Descriptors.
J. Chem. Inf. Model., 2010

Application of Information - Theoretic Concepts in Chemoinformatics.
Inf., 2010

2009
Predicting the similarity search performance of fingerprints and their combination with molecular property descriptors using probabilistic and information theoretic modeling.
Stat. Anal. Data Min., 2009

Development of a Fingerprint Reduction Approach for Bayesian Similarity Searching Based on Kullback-Leibler Divergence Analysis.
J. Chem. Inf. Model., 2009

2008
Bayesian Similarity Searching in High-Dimensional Descriptor Spaces Combined with Kullback-Leibler Descriptor Divergence Analysis.
J. Chem. Inf. Model., 2008

2007
Bayesian Interpretation of a Distance Function for Navigating High-Dimensional Descriptor Spaces.
J. Chem. Inf. Model., 2007

Introduction of an Information-Theoretic Method to Predict Recovery Rates of Active Compounds for Bayesian in Silico Screening: Theory and Screening Trials.
J. Chem. Inf. Model., 2007


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