Mattia Bernetti

According to our database, Mattia Bernetti authored at least 9 papers between 2017 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

Critical Assessment of a Structure-Based Pipeline for Targeting the Long Noncoding RNA MALAT1.

Riccardo Aguti, Mattia Bernetti, Gian Marco Elisi, Andrea Cavalli, Matteo Masetti

J. Chem. Inf. Model., 2026

2025

Path-Based Nonequilibrium Binding Free Energy Estimation, from Protein-Ligand to RNA-Ligand Binding.

Eleonora Serra, Alessia Ghidini, Riccardo Aguti, Mattia Bernetti, Sergio Decherchi, Andrea Cavalli

J. Chem. Inf. Model., 2025

Application of Deep Learning to Predict the Persistence, Bioaccumulation, and Toxicity of Pharmaceuticals.

Dominga Evangelista, Elliot Nelson, Rachael Skyner, Ben Tehan, Mattia Bernetti, Marinella Roberti, Maria Laura Bolognesi, Giovanni Bottegoni

J. Chem. Inf. Model., 2025

Dissecting the RAD51-BRC4 Interaction Landscape through Integrative Molecular Simulations and Experimental Biophysics.

Veronica Bresciani, Francesco Rinaldi, Pedro Franco, Stefania Girotto, Andrea Cavalli, Julian D. Langer, Matteo Masetti, Mattia Bernetti

J. Chem. Inf. Model., 2025

2024

Similarities and Differences in Ligand Binding to Protein and RNA Targets: The Case of Riboflavin.

Stefano Bosio, Mattia Bernetti, Walter Rocchia, Matteo Masetti

J. Chem. Inf. Model., 2024

2019

Predicting Residence Time and Drug Unbinding Pathway through Scaled Molecular Dynamics.

Doris A. Schuetz, Mattia Bernetti, Martina Bertazzo, Djordje Musil, Hans-Michael Eggenweiler, Maurizio Recanatini, Matteo Masetti, Gerhard F. Ecker, Andrea Cavalli

J. Chem. Inf. Model., 2019

2018

Fully Flexible Docking via Reaction-Coordinate-Independent Molecular Dynamics Simulations.

Martina Bertazzo, Mattia Bernetti, Maurizio Recanatini, Matteo Masetti, Andrea Cavalli

J. Chem. Inf. Model., 2018

Binding Residence Time through Scaled Molecular Dynamics: A Prospective Application to hDAAO Inhibitors.

Mattia Bernetti, Elena Rosini, Luca Mollica, Matteo Masetti, Loredano Pollegioni, Maurizio Recanatini, Andrea Cavalli

J. Chem. Inf. Model., 2018

2017

Development of a multisite model for Ni(II) ion in solution from thermodynamic and kinetic data.

Matteo Masetti, Francesco Musiani, Mattia Bernetti, Federico Falchi, Andrea Cavalli, Stefano Ciurli, Maurizio Recanatini

J. Comput. Chem., 2017