Max W. Shen

According to our database, Max W. Shen authored at least 13 papers between 2016 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

Do we need equivariant models for molecule generation?

Ewa M. Nowara, Joshua Rackers, Patricia Suriana, Pan Kessel, Max Shen, Andrew Martin Watkins, Michael Maser

CoRR, July, 2025

2024

Hierarchically branched diffusion models leverage dataset structure for class-conditional generation.

Alex M. Tseng, Max W. Shen, Tommaso Biancalani, Gabriele Scalia

Trans. Mach. Learn. Res., 2024

Score-based Explainability for Graph Representations.

Ehsan Hajiramezanali, Sepideh Maleki, Max W. Shen, Kangway V. Chuang, Tommaso Biancalani, Gabriele Scalia

Trans. Mach. Learn. Res., 2024

2023

Towards Understanding and Improving GFlowNet Training.

Max W. Shen, Emmanuel Bengio, Ehsan Hajiramezanali, Andreas Loukas, Kyunghyun Cho, Tommaso Biancalani

Proceedings of the International Conference on Machine Learning, 2023

2022

Hierarchically branched diffusion models for efficient and interpretable multi-class conditional generation.

Alex M. Tseng, Tommaso Biancalani, Max W. Shen, Gabriele Scalia

CoRR, 2022

Conditional Diffusion with Less Explicit Guidance via Model Predictive Control.

Max W. Shen, Ehsan Hajiramezanali, Gabriele Scalia, Alex M. Tseng, Nathaniel Diamant, Tommaso Biancalani, Andreas Loukas

CoRR, 2022

Trust in AI: Interpretability is not necessary or sufficient, while black-box interaction is necessary and sufficient.

Max W. Shen

CoRR, 2022

2021

Detection of gene cis-regulatory element perturbations in single-cell transcriptomes.

Grace Hui Ting Yeo, Oscar Juez, Qing Chen, Budhaditya Banerjee, Lendy Chu, Max W. Shen, May Sabry, Ive Logister, Richard I. Sherwood, David K. Gifford

PLoS Comput. Biol., 2021

Machine learning based CRISPR gRNA design for therapeutic exon skipping.

Wilson Louie, Max W. Shen, Zakir Tahiry, Sophia Zhang, Daniel Worstell, Christopher A. Cassa, Richard I. Sherwood, David K. Gifford

PLoS Comput. Biol., 2021

2018

Predictable and precise template-free CRISPR editing of pathogenic variants.

Max W. Shen, Mandana Arbab, Jonathan Y. Hsu, Daniel Worstell, Sannie J. Culbertson, Olga Krabbe, Christopher A. Cassa, David R. Liu, David K. Gifford, Richard I. Sherwood

Nat., 2018

2016

Assembly of long error-prone reads using de Bruijn graphs.

Yu Lin, Jeffrey Yuan, Mikhail Kolmogorov, Max W. Shen, Mark Chaisson, Pavel A. Pevzner

Proc. Natl. Acad. Sci. USA, 2016

plasmidSPAdes: assembling plasmids from whole genome sequencing data.

Dmitry Antipov, Nolan Hartwick, Max W. Shen, Mikhail Raiko, Alla L. Lapidus, Pavel A. Pevzner

Bioinform., 2016

Assembly of Long Error-Prone Reads Using de Bruijn Graphs.

Yu Lin, Max W. Shen, Jeffrey Yuan, Mark Chaisson, Pavel A. Pevzner

Proceedings of the Research in Computational Molecular Biology - 20th Annual Conference, 2016