Michael P. H. Stumpf

According to our database1, Michael P. H. Stumpf authored at least 28 papers between 2005 and 2018.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

On csauthors.net:

Bibliography

2018
PEITH(Θ): perfecting experiments with information theory in Python with GPU support.
Bioinformatics, 2018

2016
Inferring extrinsic noise from single-cell gene expression data using approximate Bayesian computation.
BMC Systems Biology, 2016

MEANS: python package for Moment Expansion Approximation, iNference and Simulation.
Bioinformatics, 2016

2015
Great cities look small.
CoRR, 2015

SYSBIONS: nested sampling for systems biology.
Bioinformatics, 2015

2014
Model Selection in Systems Biology Depends on Experimental Design.
PLoS Computational Biology, 2014

Derivative processes for modelling metabolic fluxes.
Bioinformatics, 2014

StochDecomp - Matlab package for noise decomposition in stochastic biochemical systems.
Bioinformatics, 2014

On Industrial Strength Bio-design Automation.
Proceedings of the Information and Communication Technologies in Education, Research, and Industrial Applications, 2014

2013
Maximizing the Information Content of Experiments in Systems Biology.
PLoS Computational Biology, 2013

Balancing the Robustness and Predictive Performance of Biomarkers.
Journal of Computational Biology, 2013

2012
Considerate approaches to constructing summary statistics for ABC model selection.
Statistics and Computing, 2012

Inference of temporally varying Bayesian Networks.
Bioinformatics, 2012

StochSens - matlab package for sensitivity analysis of stochastic chemical systems.
Bioinformatics, 2012

Which species is it? Species-driven gene name disambiguation using random walks over a mixture of adjacency matrices.
Bioinformatics, 2012

2011
From qualitative data to quantitative models: analysis of the phage shock protein stress response in Escherichia coli.
BMC Systems Biology, 2011

GPU accelerated biochemical network simulation.
Bioinformatics, 2011

2010
Statistical inference of the time-varying structure of gene-regulation networks.
BMC Systems Biology, 2010

Trees on networks: resolving statistical patterns of phylogenetic similarities among interacting proteins.
BMC Bioinformatics, 2010

Simulation-based model selection for dynamical systems in systems and population biology.
Bioinformatics, 2010

ABC-SysBio - approximate Bayesian computation in Python with GPU support.
Bioinformatics, 2010

2009
Gaussian process regression bootstrapping: exploring the effects of uncertainty in time course data.
Bioinformatics, 2009

2008
Nonidentifiability of the Source of Intrinsic Noise in Gene Expression from Single-Burst Data.
PLoS Computational Biology, 2008

2007
Using Likelihood-Free Inference to Compare Evolutionary Dynamics of the Protein Networks of H. pylori and P. falciparum.
PLoS Computational Biology, 2007

SNPSTR: a database of compound microsatellite-SNP markers.
Nucleic Acids Research, 2007

Generating confidence intervals on biological networks.
BMC Bioinformatics, 2007

2006
Multi-model inference of network properties from incomplete data.
J. Integrative Bioinformatics, 2006

2005
Statistical Model Selection Methods Applied to Biological Networks.
, 2005


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