Pasi Rastas

According to our database, Pasi Rastas authored at least 15 papers between 2004 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2020

Lep-Anchor: automated construction of linkage map anchored haploid genomes.

Pasi Rastas

Bioinform., 2020

2019

Kermit: linkage map guided long read assembly.

Riku Walve, Pasi Rastas, Leena Salmela

Algorithms Mol. Biol., 2019

2018

Kermit: Guided Long Read Assembly using Coloured Overlap Graphs.

Riku Walve, Pasi Rastas, Leena Salmela

Proceedings of the 18th International Workshop on Algorithms in Bioinformatics, 2018

2017

Lep-MAP3: robust linkage mapping even for low-coverage whole genome sequencing data.

Pasi Rastas

Bioinform., 2017

2013

Lep-MAP: fast and accurate linkage map construction for large SNP datasets.

Pasi Rastas, Lars Paulin, Ilkka Hanski, Rainer Lehtonen, Petri Auvinen

Bioinform., 2013

2011

Finding Significant Matches of Position Weight Matrices in Linear Time.

Cinzia Pizzi, Pasi Rastas, Esko Ukkonen

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

2009

Computational Techniques for Haplotype Inference and for Local Alignment Significance.

Pasi Rastas

PhD thesis, 2009

MOODS: fast search for position weight matrix matches in DNA sequences.

Janne H. Korhonen, Petri Martinmäki, Cinzia Pizzi, Pasi Rastas, Esko Ukkonen

Bioinform., 2009

A General Framework for Local Pairwise Alignment Statistics with Gaps.

Pasi Rastas

Proceedings of the Algorithms in Bioinformatics, 9th International Workshop, 2009

2008

Fast Bayesian Haplotype Inference Via Context Tree Weighting.

Pasi Rastas, Jussi Kollin, Mikko Koivisto

Proceedings of the Algorithms in Bioinformatics, 8th International Workshop, 2008

2007

Haplotype Inference Via Hierarchical Genotype Parsing.

Pasi Rastas, Esko Ukkonen

Proceedings of the Algorithms in Bioinformatics, 7th International Workshop, 2007

Fast Search Algorithms for Position Specific Scoring Matrices.

Cinzia Pizzi, Pasi Rastas, Esko Ukkonen

Proceedings of the Bioinformatics Research and Development, First International Conference, 2007

2005

A Hidden Markov Technique for Haplotype Reconstruction.

Pasi Rastas, Mikko Koivisto, Heikki Mannila, Esko Ukkonen

Proceedings of the Algorithms in Bioinformatics, 5th International Workshop, 2005

2004

Recombination Systems.

Mikko Koivisto, Pasi Rastas, Esko Ukkonen

Proceedings of the Theory Is Forever, 2004

Hidden Markov Modelling Techniques for Haplotype Analysis.

Mikko Koivisto, Teemu Kivioja, Heikki Mannila, Pasi Rastas, Esko Ukkonen

Proceedings of the Algorithmic Learning Theory, 15th International Conference, 2004