Petr Sulc

Orcid: 0000-0003-1565-6769

According to our database1, Petr Sulc authored at least 15 papers between 2010 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Links

On csauthors.net:

Bibliography

2024
Preface.
Nat. Comput., September, 2024

2023
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations.
J. Chem. Inf. Model., May, 2023

oxDNA: coarse-grained simulations of nucleic acids made simple.
J. Open Source Softw., January, 2023

Coarse-Grained Simulations Of Dna And Rna Systems With Oxdna And Oxrna Models: Tutorial.
Proceedings of the Winter Simulation Conference, 2023

2022
Generative and interpretable machine learning for aptamer design and analysis of in vitro sequence selection.
PLoS Comput. Biol., September, 2022

Nanobase.org: a repository for DNA and RNA nanostructures.
Nucleic Acids Res., 2022

ExpertRNA: A New Framework for RNA Secondary Structure Prediction.
INFORMS J. Comput., 2022

2021
OxDNA.org: a public webserver for coarse-grained simulations of DNA and RNA nanostructures.
Nucleic Acids Res., 2021

2019
TacoxDNA: A user-friendly web server for simulations of complex DNA structures, from single strands to origami.
J. Comput. Chem., 2019

2017
Pre-stressed rubber material constant estimation for resilient wheel application.
Adv. Eng. Softw., 2017

2015
A comparison between parallelization approaches in molecular dynamics simulations on GPUs.
J. Comput. Chem., 2015

2014
Simulating a burnt-bridges DNA motor with a coarse-grained DNA model.
Nat. Comput., 2014

2013
Optimal Distributed Control of Reactive Power via the Alternating Direction Method of Multipliers.
CoRR, 2013

2011
Options for Control of Reactive Power by Distributed Photovoltaic Generators.
Proc. IEEE, 2011

2010
Quantifying Slow Evolutionary Dynamics in RNA Fitness Landscapes.
J. Bioinform. Comput. Biol., 2010


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