Prem Chapagain

According to our database, Prem Chapagain authored at least 7 papers between 2022 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

A comprehensive survey of scoring functions for protein docking models.

Azam Shirali, Vitalii Stebliankin, Ukesh Karki, Jimeng Shi, Prem Chapagain, Giri Narasimhan

BMC Bioinform., December, 2025

Mapping the Interactions Among Class IIa Histone Deacetylases and Myocyte Enhancer Factor 2s.

Narayan Gautam, Sophia Wang, Aykut Üren, Prem P. Chapagain, Narayan P. Adhikari, Purushottam B. Tiwari

J. Chem. Inf. Model., 2025

2024

Simulation-Guided Molecular Modeling of Nisin and Lipid II Assembly and Membrane Pore Formation.

Hugo A. Perez, Zhe Wang, Bernard S. Gerstman, Jin He, Prem Chapagain

J. Chem. Inf. Model., 2024

Insights into the DNA and RNA Interactions of Human Topoisomerase III Beta Using Molecular Dynamics Simulations.

Yasir Mamun, Yuk-Ching Tse-Dinh, Prem Chapagain

J. Chem. Inf. Model., 2024

2023

Evaluating protein binding interfaces with transformer networks.

Vitalii Stebliankin, Azam Shirali, Prabin Baral, Jimeng Shi, Prem Chapagain, Kalai Mathee, Giri Narasimhan

Nat. Mac. Intell., September, 2023

A 5′-Flanking C/G Pair at the Core Region Enhances the Recognition and Binding of Kaiso to Methylated DNA.

Bidhya Thapa, Narayan P. Adhikari, Purushottam B. Tiwari, Prem Chapagain

J. Chem. Inf. Model., April, 2023

2022

Molecular Modeling and Simulation of the Peptidoglycan Layer of Gram-Positive Bacteria <i>Staphylococcus aureus</i>.

Rudramani Pokhrel, Rojesh Shakya, Prabin Baral, Prem Chapagain

J. Chem. Inf. Model., 2022