Giri Narasimhan

According to our database, Giri Narasimhan authored at least 111 papers between 1989 and 2024.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of three.

2024

FIDLAR: Forecast-Informed Deep Learning Architecture for Flood Mitigation.

Jimeng Shi, Zeda Yin, Arturo Leon, Jayantha Obeysekera, Giri Narasimhan

CoRR, 2024

Foot in the Door: Developing Opportunities for Computing Undergraduates to Gain Industry Experience.

Nimmi Arunachalam, Stephanie J. Lunn, Mark Allen Weiss, Jason Liu, Giri Narasimhan

Proceedings of the 55th ACM Technical Symposium on Computer Science Education, 2024

2023

Evaluating protein binding interfaces with transformer networks.

Vitalii Stebliankin, Azam Shirali, Prabin Baral, Jimeng Shi, Prem Chapagain, Kalai Mathee, Giri Narasimhan

Nat. Mac. Intell., September, 2023

Microbiome maps: Hilbert curve visualizations of metagenomic profiles.

Camilo Valdes, Vitalii Stebliankin, Daniel Ruiz-Perez, Ji In Park, Hajeong Lee, Giri Narasimhan

Frontiers Bioinform., May, 2023

The Power of Explainability in Forecast-Informed Deep Learning Models for Flood Mitigation.

Jimeng Shi, Vitalii Stebliankin, Giri Narasimhan

CoRR, 2023

Graph Transformer Network for Flood Forecasting with Heterogeneous Covariates.

Jimeng Shi, Vitalii Stebliankin, Zhaonan Wang, Shaowen Wang, Giri Narasimhan

CoRR, 2023

Deep Learning Models for Water Stage Predictions in South Florida.

Jimeng Shi, Zeda Yin, Rukmangadh Myana, Khandker Ishtiaq, Anupama John, Jayantha Obeysekera, Arturo Leon, Giri Narasimhan

CoRR, 2023

Engineering an algorithm for constructing low-stretch geometric graphs with near-greedy average-degrees.

FNU Shariful, Justin Weathers, Anirban Ghosh, Giri Narasimhan

CoRR, 2023

Mitigating Multisource Biases in Graph Neural Networks via Real Counterfactual Samples.

Zichong Wang, Giri Narasimhan, Xin Yao, Wenbin Zhang

Proceedings of the IEEE International Conference on Data Mining, 2023

Explainable Parallel RCNN with Novel Feature Representation for Time Series Forecasting.

Jimeng Shi, Rukmangadh Myana, Vitalii Stebliankin, Azam Shirali, Giri Narasimhan

Proceedings of the Advanced Analytics and Learning on Temporal Data, 2023

2022

Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications.

Zhipeng Cai, Giri Narasimhan, Pavel Skums

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

Time Series Forecasting (TSF) Using Various Deep Learning Models.

Jimeng Shi, Mahek Jain, Giri Narasimhan

CoRR, 2022

2021

Special Issue: 9th International Computational Advances in Bio and Medical Sciences (ICCABS 2019).

Ion I. Mandoiu, T. M. Murali, Giri Narasimhan, Sanguthevar Rajasekaran, Pavel Skums, Alexander Zelikovsky

J. Comput. Biol., 2021

Learning Cache Replacement with CACHEUS.

Liana V. Rodriguez, Farzana Beente Yusuf, Steven Lyons, Eysler Paz, Raju Rangaswami, Jason Liu, Ming Zhao, Giri Narasimhan

Proceedings of the 19th USENIX Conference on File and Storage Technologies, 2021

Causal Inference Methods and their Challenges: The Case of 311 Data.

Farzana Beente Yusuf, Shaoming Cheng, Sukumar Ganapati, Giri Narasimhan

Proceedings of the DG.O'21: The 22nd Annual International Conference on Digital Government Research, 2021

2020

EXP4-DFDC: A Non-Stochastic Multi-Armed Bandit for Cache Replacement.

Farzana Beente Yusuf, Camilo Valdes, Vitalii Stebliankin, Giuseppe Vietri, Giri Narasimhan

CoRR, 2020

So you think you can PLS-DA?

Daniel Ruiz-Perez, Haibin Guan, Purnima Madhivanan, Kalai Mathee, Giri Narasimhan

BMC Bioinform., 2020

2019

MATria: a unified centrality algorithm.

Trevor Cickovski, Vanessa Aguiar-Pulido, Giri Narasimhan

BMC Bioinform., 2019

Large scale microbiome profiling in the cloud.

Camilo Valdes, Vitalii Stebliankin, Giri Narasimhan

Bioinform., 2019

Effects of Various Alpha-1 Antitrypsin Supplement Dosages on the Lung Microbiome and Metabolome.

Trevor Cickovski, Astrid Manuel, Kalai Mathee, Michael Campos, Giri Narasimhan

Proceedings of the Computational Advances in Bio and Medical Sciences, 2019

2018

Constructing lightweight and flexible pipelines using Plugin-Based Microbiome Analysis (PluMA).

Trevor Cickovski, Giri Narasimhan

Bioinform., 2018

Inferring Relationships in Microbiomes from Signed Bayesian Networks.

Musfiqur Rahman Sazal, Daniel Ruiz-Perez, Trevor Cickovski, Giri Narasimhan

Proceedings of the 8th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2018

Driving Cache Replacement with ML-based LeCaR.

Giuseppe Vietri, Liana V. Rodriguez, Wendy A. Martinez, Steven Lyons, Jason Liu, Raju Rangaswami, Ming Zhao, Giri Narasimhan

Proceedings of the 10th USENIX Workshop on Hot Topics in Storage and File Systems, 2018

2017

ATria: a novel centrality algorithm applied to biological networks.

Trevor Cickovski, Eli Peake, Vanessa Aguiar-Pulido, Giri Narasimhan

BMC Bioinform., 2017

2016

Planar Geometric Spanners.

Joachim Gudmundsson, Giri Narasimhan, Michiel H. M. Smid

Encyclopedia of Algorithms, 2016

Geometric Spanners.

Joachim Gudmundsson, Giri Narasimhan, Michiel H. M. Smid

Encyclopedia of Algorithms, 2016

Applications of Geometric Spanner Networks.

Joachim Gudmundsson, Giri Narasimhan, Michiel H. M. Smid

Encyclopedia of Algorithms, 2016

CacheDedup: In-line Deduplication for Flash Caching.

Wenji Li, Gregory Jean-Baptise, Juan Riveros, Giri Narasimhan, Tony Zhang, Ming Zhao

Proceedings of the 14th USENIX Conference on File and Storage Technologies, 2016

2015

Automatic Construction of 3-D Building Model From Airborne LIDAR Data Through 2-D Snake Algorithm.

Jianhua Yan, Keqi Zhang, Chengcui Zhang, Shu-Ching Chen, Giri Narasimhan

IEEE Trans. Geosci. Remote. Sens., 2015

GPUDePiCt: A Parallel Implementation of a Clustering Algorithm for Computing Degenerate Primers on Graphics Processing Units.

Trevor Cickovski, Tiffany Flor, Galen Irving-Sachs, Philip Novikov, James Parda, Giri Narasimhan

IEEE ACM Trans. Comput. Biol. Bioinform., 2015

Analyzing Adaptive Cache Replacement Strategies.

Leo Shao, Mario E. Consuegra, Raju Rangaswami, Giri Narasimhan

CoRR, 2015

2013

Vector repacking algorithms for power-aware computing.

Mario E. Consuegra, Giri Narasimhan, Raju Rangaswami

Proceedings of the International Green Computing Conference, 2013

Geometric Avatar Problems.

Mario E. Consuegra, Giri Narasimhan

Proceedings of the IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science, 2013

2011

CloG: A pipeline for closing gaps in a draft assembly using short reads.

Xing Yang, Daniel Medvin, Giri Narasimhan, Deborah Yoder-Himes, Stephen Lory

Proceedings of the IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, 2011

Invited: Comparative microbial genomics.

Giri Narasimhan

Proceedings of the IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, 2011

2010

Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications.

Ion I. Mandoiu, Giri Narasimhan, Yi Pan, Yanqing Zhang

IEEE ACM Trans. Comput. Biol. Bioinform., 2010

Clustering Genes Using Heterogeneous Data Sources.

Erliang Zeng, Chengyong Yang, Tao Li, Giri Narasimhan

Int. J. Knowl. Discov. Bioinform., 2010

2009

On the dilation spectrum of paths, cycles, and trees.

Rolf Klein, Christian Knauer, Giri Narasimhan, Michiel H. M. Smid

Comput. Geom., 2009

Region-restricted clustering for geographic data mining.

Joachim Gudmundsson, Marc J. van Kreveld, Giri Narasimhan

Comput. Geom., 2009

Serial evolutionary networks of within-patient HIV-1 sequences reveal patterns of evolution of X4 strains.

Patricia Buendia, Giri Narasimhan

BMC Syst. Biol., 2009

Standby power reduction and SRAM cell optimization for 65nm technology.

S. Lakshminarayanan, J. Joung, Giri Narasimhan, Ravi Kapre, M. Slanina, J. Tung, Morgan Whately, C.-L. Hou, W.-J. Liao, S.-C. Lin, P.-G. Ma, C.-W. Fan, M.-C. Hsieh, F.-C. Liu, K.-L. Yeh, W.-C. Tseng, S. W. Lu

Proceedings of the 10th International Symposium on Quality of Electronic Design (ISQED 2009), 2009

Weighted Consensus Clustering for Identifying Functional Modules in Protein-Protein Interaction Networks.

Yi Zhang, Erliang Zeng, Tao Li, Giri Narasimhan

Proceedings of the International Conference on Machine Learning and Applications, 2009

2008

Planar Geometric Spanners.

Joachim Gudmundsson, Giri Narasimhan, Michiel H. M. Smid

Proceedings of the Encyclopedia of Algorithms - 2008 Edition, 2008

Geometric Spanners.

Joachim Gudmundsson, Giri Narasimhan, Michiel H. M. Smid

Proceedings of the Encyclopedia of Algorithms - 2008 Edition, 2008

Applications of Geometric Spanner Networks.

Joachim Gudmundsson, Giri Narasimhan, Michiel H. M. Smid

Proceedings of the Encyclopedia of Algorithms - 2008 Edition, 2008

Approximate distance oracles for geometric spanners.

Joachim Gudmundsson, Christos Levcopoulos, Giri Narasimhan, Michiel H. M. Smid

ACM Trans. Algorithms, 2008

The role of internal node sequences and the molecular clock in the analysis of serially-sampled data.

Patricia Buendia, Timothy M. Collins, Giri Narasimhan

Int. J. Bioinform. Res. Appl., 2008

A Functional Network of Yeast Genes Using Gene Ontology Information.

Erliang Zeng, Giri Narasimhan, Lisa Schneper, Kalai Mathee

Proceedings of the 2008 IEEE International Conference on Bioinformatics and Biomedicine, 2008

A branch-and-bound approach to knowledge-based protein structure assembly.

Gaolin Zheng, Giri Narasimhan

Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

2007

Distance-preserving approximations of polygonal paths.

Joachim Gudmundsson, Giri Narasimhan, Michiel H. M. Smid

Comput. Geom., 2007

Sliding MinPD: building evolutionary networks of serial samples via an automated recombination detection approach.

Patricia Buendia, Giri Narasimhan

Bioinform., 2007

Enhancing Motif Refinement by Incorporating Comparative Genomics Data.

Erliang Zeng, Giri Narasimhan

Proceedings of the Bioinformatics Research and Applications, Third International Symposium, 2007

Searching for Recombinant Donors in a Phylogenetic Network of Serial Samples.

Patricia Buendia, Giri Narasimhan

Proceedings of the Bioinformatics Research and Applications, Third International Symposium, 2007

A Graph Reduction Method for 2D Snake Problems.

Jianhua Yan, Keqi Zhang, Chengcui Zhang, Shu-Ching Chen, Giri Narasimhan

Proceedings of the 2007 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2007), 2007

CyberBridges A Model Collaboration Infrastructure for e-Science.

Heidi L. Alvarez, David C. Chatfield, Donald A. Cox, Eric Crumpler, Cassian D'Cunha, Ronald Gutierrez, Julio Ibarra, Eric Johnson, Kuldeep Kumar, Tom Milledge, Giri Narasimhan, Seyed Masoud Sadjadi, Chi Zhang

Proceedings of the Seventh IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2007), 2007

On the Effectiveness of Constraints Sets in Clustering Genes.

Erliang Zeng, Chengyong Yang, Tao Li, Giri Narasimhan

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

SBLAST: Structural Basic Local Alignment Searching Tools using Geometric Hashing.

Tom Milledge, Gaolin Zheng, Tim Mullins, Giri Narasimhan

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

Geometric spanner networks.

Giri Narasimhan, Michiel H. M. Smid

Cambridge University Press, 2007

2006

Serial NetEvolve: a flexible utility for generating serially-sampled sequences along a tree or recombinant network.

Patricia Buendia, Giri Narasimhan

Bioinform., 2006

Pooling Evidence to Identify Cell Cycle-Regulated Genes.

Gaolin Zheng, Tom Milledge, E. Olusegun George, Giri Narasimhan

Proceedings of the Computational Science, 2006

Discovering Sequence-Structure Patterns in Proteins with Variable Secondary Structure.

Tom Milledge, Gaolin Zheng, Giri Narasimhan

Proceedings of the Computational Science, 2006

Reconstructing Ancestor-Descendant Lineages from Serially-Sampled Data: A Comparison Study.

Patricia Buendia, Timothy M. Collins, Giri Narasimhan

Proceedings of the Computational Science, 2006

06481 Abstracts Collection - Geometric Networks and Metric Space Embeddings.

Joachim Gudmundsson, Rolf Klein, Giri Narasimhan, Michiel H. M. Smid, Alexander Wolff

Proceedings of the Geometric Networks and Metric Space Embeddings, 26.11. - 01.12.2006, 2006

Mining the Database of Transcription Binding Sites.

Wei Peng, Tao Li, Giri Narasimhan

Proceedings of the Sixth IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2006), 2006

2005

Fast Pruning of Geometric Spanners.

Joachim Gudmundsson, Giri Narasimhan, Michiel H. M. Smid

Proceedings of the STACS 2005, 2005

A Knowledge-Driven Method to Evaluate Multi-source Clustering.

Chengyong Yang, Erliang Zeng, Tao Li, Giri Narasimhan

Proceedings of the Parallel and Distributed Processing and Applications, 2005

Exact and Approximation Algorithms for Computing the Dilation Spectrum of Paths, Trees, and Cycles.

Rolf Klein, Christian Knauer, Giri Narasimhan, Michiel H. M. Smid

Proceedings of the Algorithms and Computation, 16th International Symposium, 2005

Clustering Using Adaptive Self-organizing Maps (ASOM) and Applications.

Yong Wang, Chengyong Yang, Kalai Mathee, Giri Narasimhan

Proceedings of the Computational Science, 2005

Clustering Genes Using Gene Expression and Text Literature Data.

Chengyong Yang, Erliang Zeng, Tao Li, Giri Narasimhan

Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, 2005

Querying a Database of regulatory Elements.

Chengyong Yang, Erliang Zeng, Kalai Mathee, Giri Narasimhan

Proceedings of the Advances in Bioinformatics and Its Applications, 2005

Training Set Design for Pattern Discovery with Applications to protein Motif Detection.

Yanli Sun, Zhengyue Deng, Giri Narasimhan, Kalai Mathee

Proceedings of the Advances in Bioinformatics and Its Applications, 2005

An Application of Association Rule Mining to HLA-a*0201 epitope Prediction.

Tom Milledge, Gaolin Zheng, Giri Narasimhan

Proceedings of the Advances in Bioinformatics and Its Applications, 2005

Predicting and Characterizing metal-binding sites using Support Vector Machines.

Leonardo Bobadilla, Fernando Niño, Giri Narasimhan

Proceedings of the Advances in Bioinformatics and Its Applications, 2005

2004

Approximating geometric bottleneck shortest paths.

Prosenjit Bose, Anil Maheshwari, Giri Narasimhan, Michiel H. M. Smid, Norbert Zeh

Comput. Geom., 2004

MinPD: Distance-Based Phylogenetic Analysis and Recombination Detection of Serially-Sampled HIV Quasispecies.

Patricia Buendia, Giri Narasimhan

Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

2003

Balanced Partition of Minimum Spanning Trees.

Mattias Andersson, Joachim Gudmundsson, Christos Levcopoulos, Giri Narasimhan

Int. J. Comput. Geom. Appl., 2003

Degenerate Primer Design via Clustering.

Xintao Wei, David N. Kuhn, Giri Narasimhan

Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003

2002

Fast Greedy Algorithms for Constructing Sparse Geometric Spanners.

Joachim Gudmundsson, Christos Levcopoulos, Giri Narasimhan

SIAM J. Comput., 2002

Approximation Algorithms for the Bottleneck Stretch Factor Problem.

Giri Narasimhan, Michiel H. M. Smid

Nord. J. Comput., 2002

Mining Protein Sequences for Motifs.

Giri Narasimhan, Changsong Bu, Yuan Gao, Xuning Wang, Ning Xu, Kalai Mathee

J. Comput. Biol., 2002

Optimally computing a shortest weakly visible line segment inside a simple polygon.

Binay K. Bhattacharya, Gautam Das, Asish Mukhopadhyay, Giri Narasimhan

Comput. Geom., 2002

Improved Algorithms for Constructing Fault-Tolerant Spanners.

Christos Levcopoulos, Giri Narasimhan, Michiel H. M. Smid

Algorithmica, 2002

Approximate distance oracles for geometric graphs.

Joachim Gudmundsson, Christos Levcopoulos, Giri Narasimhan, Michiel H. M. Smid

Proceedings of the Thirteenth Annual ACM-SIAM Symposium on Discrete Algorithms, 2002

Approximate Distance Oracles Revisited.

Joachim Gudmundsson, Christos Levcopoulos, Giri Narasimhan, Michiel H. M. Smid

Proceedings of the Algorithms and Computation, 13th International Symposium, 2002

2001

Approximating a Minimum Manhattan Network.

Joachim Gudmundsson, Christos Levcopoulos, Giri Narasimhan

Nord. J. Comput., 2001

Geometric Minimum Spanning Trees via Well-Separated Pair Decompositions.

Giri Narasimhan, Martin Zachariasen

ACM J. Exp. Algorithmics, 2001

A Generalization of maximal independent sets.

Arun K. Jagota, Giri Narasimhan, Lubomír Soltés

Discret. Appl. Math., 2001

Optimal Algorithms for Two-Guard Walkability of Simple Polygons.

Binay K. Bhattacharya, Asish Mukhopadhyay, Giri Narasimhan

Proceedings of the Algorithms and Data Structures, 7th International Workshop, 2001

Algorithms for facility location problems with outliers.

Moses Charikar, Samir Khuller, David M. Mount, Giri Narasimhan

Proceedings of the Twelfth Annual Symposium on Discrete Algorithms, 2001

2000

Approximating the Stretch Factor of Euclidean Graphs.

Giri Narasimhan, Michiel H. M. Smid

SIAM J. Comput., 2000

Improved Greedy Algorithms for Constructing Sparse Geometric Spanners.

Joachim Gudmundsson, Christos Levcopoulos, Giri Narasimhan

Proceedings of the Algorithm Theory, 2000

1999

On Hamiltonian Triangulations in Simple Polygons.

Giri Narasimhan

Int. J. Comput. Geom. Appl., 1999

Motif Detection in Protein Sequences.

Yuan Gao, Kalai Mathee, Giri Narasimhan, Xuning Wang

Proceedings of the Sixth International Symposium on String Processing and Information Retrieval and Fifth International Workshop on Groupware, 1999

Approximating Minimum Manhattan Networks.

Joachim Gudmundsson, Christos Levcopoulos, Giri Narasimhan

Proceedings of the Randomization, 1999

1998

Information capacity of binary weights associative memories.

Arun K. Jagota, Giri Narasimhan, Kenneth W. Regan

Neurocomputing, 1998

Efficient Algorithms for Constructing Fault-Tolerant Geometric Spanners.

Christos Levcopoulos, Giri Narasimhan, Michiel H. M. Smid

Proceedings of the Thirtieth Annual ACM Symposium on the Theory of Computing, 1998

Resource-Constrained Geometric Network Optimization.

Esther M. Arkin, Joseph S. B. Mitchell, Giri Narasimhan

Proceedings of the Fourteenth Annual Symposium on Computational Geometry, 1998

1997

A Fast Algorithm for Constructing Sparse Euclidean Spanners.

Gautam Das, Giri Narasimhan

Int. J. Comput. Geom. Appl., 1997

LR-visibility in Polygons.

Gautam Das, Paul J. Heffernan, Giri Narasimhan

Comput. Geom., 1997

On Hamiltonian Triangulations in Simple Polygons (Extended Abstract).

Giri Narasimhan

Proceedings of the Algorithms and Data Structures, 5th International Workshop, 1997

1995

New sparseness results on graph spanners.

Barun Chandra, Gautam Das, Giri Narasimhan, José Soares

Int. J. Comput. Geom. Appl., 1995

A New Way to Weigh Malnourished Euclidean Graphs.

Gautam Das, Giri Narasimhan, Jeffrey S. Salowe

Proceedings of the Sixth Annual ACM-SIAM Symposium on Discrete Algorithms, 1995

Short cuts in higher dimensional space.

Gautam Das, Giri Narasimhan

Proceedings of the 7th Canadian Conference on Computational Geometry, 1995

1994

Finding all Weakly-Visible Chords of a Polygon in Linear Time.

Gautam Das, Paul J. Heffernan, Giri Narasimhan

Nord. J. Comput., 1994

Finding All Weakly-Visible Chords of a Polygon in Linear Time (Extended Abstract).

Gautam Das, Paul J. Heffernan, Giri Narasimhan

Proceedings of the Algorithm Theory, 1994

Optimal Linear-Time Algorithm for the Shortest Illuminating Line Segment in a Polygon.

Gautam Das, Giri Narasimhan

Proceedings of the Tenth Annual Symposium on Computational Geometry, 1994

1993

Optimally Sparse Spanners in 3-Dimensional Euclidean Space.

Gautam Das, Paul J. Heffernan, Giri Narasimhan

Proceedings of the Ninth Annual Symposium on Computational GeometrySan Diego, 1993

1992

Stability number and chromatic number of tolerance graphs.

Giri Narasimhan, Rachel Manber

Discret. Appl. Math., 1992

1991

Geometric Searching and Link Distance (Extended Abstract).

Gautam Das, Giri Narasimhan

Proceedings of the Algorithms and Data Structures, 1991

1990

A Generalization of Lovasz's 0_ Function.

Giri Narasimhan, Rachel Manber

Proceedings of the Polyhedral Combinatorics, 1990

1989

A Note on the Hamiltonian Circuit Problem on Directed Path Graphs.

Giri Narasimhan

Inf. Process. Lett., 1989