Shivashankar H. Nagaraj

According to our database, Shivashankar H. Nagaraj authored at least 9 papers between 2007 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Identification of Small Open Reading Frame-encoded Proteins in the Human Genome.

Hitesh Kore, Satomi Okano, Keshava K. Datta, Jackson Thorp, Parthiban Periasamy, Mayur Divate, Upekha Liyanage, Gunter Hartel, Shivashankar H. Nagaraj, Harsha Gowda

Genom. Proteom. Bioinform., 2025

2020

A comparative study of multi-omics integration tools for cancer driver gene identification and tumour subtyping.

Anita Sathyanarayanan, Rohit Gupta, Erik W. Thompson, Dale R. Nyholt, Denis C. Bauer, Shivashankar H. Nagaraj

Briefings Bioinform., 2020

2019

Exome Sequencing Data Analysis.

Anita Sathyanarayanan, Srikanth Manda, Mukta Poojary, Shivashankar H. Nagaraj

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 3, 2019

Functional Enrichment Analysis.

Srikanth Manda, Daliah Michael, Sudhir Jadhao, Shivashankar H. Nagaraj

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 3, 2019

2011

A Boolean-based systems biology approach to predict novel genes associated with cancer: Application to colorectal cancer.

Shivashankar H. Nagaraj, Antonio Reverter

BMC Syst. Biol., 2011

2010

Regulatory impact factors: unraveling the transcriptional regulation of complex traits from expression data.

Antonio Reverter, Nicholas J. Hudson, Shivashankar H. Nagaraj, Miguel Pérez-Enciso, Brian P. Dalrymple

Bioinform., 2010

2008

<i>In silico </i>analysis of expressed sequence tags from <i>Trichostrongylus vitrinus </i>(Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches.

Shivashankar H. Nagaraj, Robin B. Gasser, Alasdair J. Nisbet, Shoba Ranganathan

BMC Bioinform., 2008

2007

ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform.

Shivashankar H. Nagaraj, Nandan Deshpande, Robin B. Gasser, Shoba Ranganathan

Nucleic Acids Res., 2007

A hitchhiker's guide to expressed sequence tag (EST) analysis.

Shivashankar H. Nagaraj, Robin B. Gasser, Shoba Ranganathan

Briefings Bioinform., 2007