Shura Hayryan

According to our database1, Shura Hayryan authored at least 11 papers between 2001 and 2020.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of five.

Timeline

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PhD thesis 
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Links

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Bibliography

2020
PBCAVE: Program for exact classification of the mesh points of a protein with possible internal cavities and its application to Poisson-Boltzmann equation solution.
Comput. Phys. Commun., 2020

2015
CAVE-CL: An OpenCL version of the package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins.
Comput. Phys. Commun., 2015

2012
ARVO-CL: The OpenCL version of the ARVO package - An efficient tool for computing the accessible surface area and the excluded volume of proteins via analytical equations.
Comput. Phys. Commun., 2012

2010
CAVE: A package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins.
Comput. Phys. Commun., 2010

2009
Enveloping triangulation method for detecting internal cavities in proteins and algorithm for computing their surface areas and volumes.
J. Comput. Chem., 2009

2007
Efficient combination of Wang-Landau and transition matrix Monte Carlo methods for protein simulations.
J. Comput. Chem., 2007

2006
An enhanced version of SMMP - open-source software package for simulation of proteins.
Comput. Phys. Commun., 2006

2005
A new analytical method for computing solvent-accessible surface area of macromolecules and its gradients.
J. Comput. Chem., 2005

ARVO: A Fortran package for computing the solvent accessible surface area and the excluded volume of overlapping spheres via analytic equations.
Comput. Phys. Commun., 2005

2003
Parallel Solution of the Poisson-Boltzmann Equation for Proteins.
Proceedings of the Computational Science - ICCS 2003, 2003

2001
Multicanonical parallel simulations of proteins with continuous potentials.
J. Comput. Chem., 2001


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