Trent E. Balius

According to our database, Trent E. Balius authored at least 9 papers between 2010 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

DOCK 6: Incorporating hierarchical traversal through precomputed ligand conformations to enable large-scale docking.

Trent E. Balius, Y. Stanley Tan, Mayukh Chakrabarti

J. Comput. Chem., 2024

2021

Property-Unmatched Decoys in Docking Benchmarks.

Reed M. Stein, Ying Yang, Trent E. Balius, Matt J. O'Meara, Jiankun Lyu, Jennifer Young, Khanh G. Tang, Brian K. Shoichet, John J. Irwin

J. Chem. Inf. Model., 2021

2018

Novel K-Ras G12C Switch-II Covalent Binders Destabilize Ras and Accelerate Nucleotide Exchange.

Chimno I. Nnadi, Meredith L. Jenkins, Daniel R. Gentile, Leslie A. Bateman, Daniel Zaidman, Trent E. Balius, Daniel K. Nomura, John E. Burke, Kevan M. Shokat, Nir London

J. Chem. Inf. Model., 2018

2017

Customizable <i>de novo</i> design strategies for DOCK: Application to HIVgp41 and other therapeutic targets.

William J. Allen, Brian C. Fochtman, Trent E. Balius, Robert C. Rizzo

J. Comput. Chem., 2017

2015

DOCK 6: Impact of new features and current docking performance.

William J. Allen, Trent E. Balius, Sudipto Mukherjee, Scott R. Brozell, Demetri Moustakas, P. Therese Lang, David A. Case, Irwin D. Kuntz, Robert C. Rizzo

J. Comput. Chem., 2015

2013

Grid-based molecular footprint comparison method for docking and <i>de novo</i> design: Application to HIVgp41.

Trent E. Balius, William J. Allen, Sudipto Mukherjee, Robert C. Rizzo

J. Comput. Chem., 2013

2012

Evaluation of DOCK 6 as a pose generation and database enrichment tool.

Scott R. Brozell, Sudipto Mukherjee, Trent E. Balius, Daniel R. Roe, David A. Case, Robert C. Rizzo

J. Comput. Aided Mol. Des., 2012

2011

Implementation and evaluation of a docking-rescoring method using molecular footprint comparisons.

Trent E. Balius, Sudipto Mukherjee, Robert C. Rizzo

J. Comput. Chem., 2011

2010

Docking Validation Resources: Protein Family and Ligand Flexibility Experiments.

Sudipto Mukherjee, Trent E. Balius, Robert C. Rizzo

J. Chem. Inf. Model., 2010