Vikas Bansal

Affiliations:
  • University of California, San Diego, Department of Pediatrics, School of Medicine, La Jolla, CA, USA
  • Scripps Translational Science Institute, Department of Molecular and Experimental Medicine, Scripps Genomic Medicine, La Jolla, CA, USA
  • University of California, San Diego, Department of Computer Science and Engineering, CA, USA (PhD 2008)


According to our database1, Vikas Bansal authored at least 20 papers between 2004 and 2023.

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Bibliography

2023
A multilocus approach for accurate variant calling in low-copy repeats using whole-genome sequencing.
Bioinform., 2023

2019
Integrating read-based and population-based phasing for dense and accurate haplotyping of individual genomes.
Bioinform., 2019

2018
An accurate algorithm for the detection of DNA fragments from dilution pool sequencing experiments.
Bioinform., 2018

Targeted Genotyping of Variable Number Tandem Repeats with AdVNTR.
Proceedings of the Research in Computational Molecular Biology, 2018

2017
A computational method for estimating the PCR duplication rate in DNA and RNA-seq experiments.
BMC Bioinform., 2017

2016
A statistical method for the detection of variants from next-generation resequencing of DNA poolsA probabilistic method for the detection and genotyping of small indels from population-scale sequence data.
Bioinform., 2016

2015
Fast individual ancestry inference from DNA sequence data leveraging allele frequencies for multiple populations.
BMC Bioinform., 2015

2011
Strobe sequence design for haplotype assembly.
BMC Bioinform., 2011

A probabilistic method for the detection and genotyping of small indels from population-scale sequence data.
Bioinform., 2011

An Application and Empirical Comparison of Statistical Analysis Methods for Associating Rare Variants to a Complex Phenotype.
Proceedings of the Biocomputing 2011: Proceedings of the Pacific Symposium, 2011

2010
A Covering Method for Detecting Genetic Associations between Rare Variants and Common Phenotypes.
PLoS Comput. Biol., 2010

A statistical method for the detection of variants from next-generation resequencing of DNA pools.
Bioinform., 2010

2008
Computational methods for analyzing human genetic variation.
PhD thesis, 2008

HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
Proceedings of the ECCB'08 Proceedings, 2008

2007
A Decomposition Theory for Phylogenetic Networks and Incompatible Characters.
J. Comput. Biol., 2007

2006
Inference about Recombination from Haplotype Data: Lower Bounds and Recombination Hotspots.
J. Comput. Biol., 2006

2005
A Fundamental Decomposition Theory for Phylogenetic Networks and Incompatible Characters.
Proceedings of the Research in Computational Molecular Biology, 2005

Improved Recombination Lower Bounds for Haplotype Data.
Proceedings of the Research in Computational Molecular Biology, 2005

2004
The Number of Recombination Events in a Sample History: Conflict Graph and Lower Bounds.
IEEE ACM Trans. Comput. Biol. Bioinform., 2004

Labeling Smart Dust.
Proceedings of the Algorithms, 2004


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