Wanwen Zeng

According to our database, Wanwen Zeng authored at least 14 papers between 2016 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

DeepDrug: A general graph-based deep learning framework for drug-drug interactions and drug-target interactions prediction.

Qijin Yin, Rui Fan, Xusheng Cao, Qiao Liu, Rui Jiang, Wanwen Zeng

Quant. Biol., September, 2023

HiChIPdb: a comprehensive database of HiChIP regulatory interactions.

Wanwen Zeng, Qiao Liu, Qijin Yin, Rui Jiang, Wing Hung Wong

Nucleic Acids Res., January, 2023

Deep generative modeling and clustering of single cell Hi-C data.

Qiao Liu, Wanwen Zeng, Wei Zhang, Sicheng Wang, Hongyang Chen, Rui Jiang, Mu Zhou, Shaoting Zhang

Briefings Bioinform., January, 2023

2022

scGraph: a graph neural network-based approach to automatically identify cell types.

Qijin Yin, Qiao Liu, Zhuoran Fu, Wanwen Zeng, Boheng Zhang, Xuegong Zhang, Rui Jiang, Hairong Lv

Bioinform., 2022

2021

SilencerDB: a comprehensive database of silencers.

Wanwen Zeng, Shengquan Chen, Xuejian Cui, Xiaoyang Chen, Zijing Gao, Rui Jiang

Nucleic Acids Res., 2021

2020

IRIS: A method for predicting in vivo RNA secondary structures using PARIS data.

Jianyu Zhou, Pan Li, Wanwen Zeng, Wenxiu Ma, Zhipeng Lu, Rui Jiang, Qiangfeng Cliff Zhang, Tao Jiang

Quant. Biol., 2020

Integrating distal and proximal information to predict gene expression via a densely connected convolutional neural network.

Wanwen Zeng, Yong Wang, Rui Jiang

Bioinform., 2020

2019

EnDisease: a manually curated database for enhancer-disease associations.

Wanwen Zeng, Xu Min, Rui Jiang

Database J. Biol. Databases Curation, 2019

2018

Prediction of enhancer-promoter interactions via natural language processing.

Wanwen Zeng, Mengmeng Wu, Rui Jiang

BMC Genom., 2018

2017

Mimvec: a deep learning approach for analyzing the human phenome.

Mingxin Gan, Wenran Li, Wanwen Zeng, Xiaojian Wang, Rui Jiang

BMC Syst. Biol., 2017

Predicting enhancers with deep convolutional neural networks.

Xu Min, Wanwen Zeng, Shengquan Chen, Ning Chen, Ting Chen, Rui Jiang

BMC Bioinform., 2017

Chromatin accessibility prediction via convolutional long short-term memory networks with k-mer embedding.

Xu Min, Wanwen Zeng, Ning Chen, Ting Chen, Rui Jiang

Bioinform., 2017

Integrating embeddings of multiple gene networks to prioritize complex disease-associated genes.

Mengmeng Wu, Wanwen Zeng, Wenqiang Liu, Yijia Zhang, Ting Chen, Rui Jiang

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2016

dbWGFP: a database and web server of human whole-genome single nucleotide variants and their functional predictions.

Jiaxin Wu, Mengmeng Wu, Lianshuo Li, Zhuo Liu, Wanwen Zeng, Rui Jiang

Database J. Biol. Databases Curation, 2016