Xinyi Liu

According to our database, Xinyi Liu authored at least 19 papers between 2011 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

ILETIA: An AI-enhanced method for individualized trigger-oocyte pickup interval estimation of progestin-primed ovarian stimulation protocol.

Binjian Wu, Qian Li, Zhe Kuang, Hongyuan Gao, Xinyi Liu, Haiyan Guo, Qiuju Chen, Xinyi Liu, Yangruizhe Jiang, Yuqi Zhang, Jinyin Zha, Mingyu Li, Qiuhan Ren, Sishuo Feng, Haicang Zhang, Xuefeng Lu, Jian Zhang

CoRR, January, 2025

ILETIA: An AI-enhanced method for individualized trigger-oocyte pickup interval estimation of progestin-primed ovarian stimulation protocol.

Binjian Wu, Qian Li, Zhe Kuang, Hongyuan Gao, Xinyi Liu, Haiyan Guo, Qiuju Chen, Xinyi Liu, Yangruizhe Jiang, Yuqi Zhang, Jinyin Zha, Mingyu Li, Qiuhan Ren, Sishuo Feng, Haicang Zhang, Xuefeng Lu, Jian Zhang

CoRR, January, 2025

2024

Deciphering the comprehensive knowledgebase landscape featuring infertility with IDDB Xtra.

Qian Li, Zhijie Hu, Jiayin He, Xinyi Liu, Yini Liu, Jiale Wei, Binjian Wu, Xun Lu, Hongxi He, Yuqi Zhang, Jixiao He, Mingyu Li, Chengwei Wu, Lijun Lv, Yang Wang, Linxuan Zhou, Quan Zhang, Jian Zhang, Xiaoyue Cheng, Hongfang Shao, Xuefeng Lu

Comput. Biol. Medicine, March, 2024

2023

AlloReverse: multiscale understanding among hierarchical allosteric regulations.

Jinyin Zha, Qian Li, Xinyi Liu, Weidong Lin, Tingting Wang, Jiacheng Wei, Ziliang Zhang, Xun Lu, Jing Wu, Duan Ni, Kun Song, Liang Zhang, Xuefeng Lu, Shaoyong Lu, Jian Zhang

Nucleic Acids Res., July, 2023

DeepAlloDriver: a deep learning-based strategy to predict cancer driver mutations.

Qianqian Song, Mingyu Li, Qian Li, Xun Lu, Kun Song, Ziliang Zhang, Jiale Wei, Liang Zhang, Jiacheng Wei, Youqiong Ye, Jinyin Zha, Qiufen Zhang, Qiang Gao, Jiang Long, Xinyi Liu, Xuefeng Lu, Jian Zhang

Nucleic Acids Res., July, 2023

2021

IDDB: a comprehensive resource featuring genes, variants and characteristics associated with infertility.

Jing Wu, Danjun Li, Xinyi Liu, Qian Li, Xinheng He, Jiale Wei, Xinyi Li, Mingyu Li, Ashfaq Ur Rehman, Yujia Xia, Chengwei Wu, Jian Zhang, Xuefeng Lu

Nucleic Acids Res., 2021

2020

Unraveling allosteric landscapes of allosterome with ASD.

Xinyi Liu, Shaoyong Lu, Kun Song, Qiancheng Shen, Duan Ni, Qian Li, Xinheng He, Hao Zhang, Qi Wang, Yingyi Chen, Xinyi Li, Jing Wu, Chunquan Sheng, Guoqiang Chen, Yaqin Liu, Xuefeng Lu, Jian Zhang

Nucleic Acids Res., 2020

2019

AlloDriver: a method for the identification and analysis of cancer driver targets.

Kun Song, Qian Li, Wei Gao, Shaoyong Lu, Qiancheng Shen, Xinyi Liu, Yongyan Wu, Binquan Wang, Houwen Lin, Guoqiang Chen, Jian Zhang

Nucleic Acids Res., 2019

2018

AlloFinder: a strategy for allosteric modulator discovery and allosterome analyses.

Min Huang, Kun Song, Xinyi Liu, Shaoyong Lu, Qiancheng Shen, Renxiao Wang, Jingze Gao, Yuanyuan Hong, Qian Li, Duan Ni, Jianrong Xu, Guoqiang Chen, Jian Zhang

Nucleic Acids Res., 2018

2017

Improved Method for the Identification and Validation of Allosteric Sites.

Kun Song, Xinyi Liu, Wenkang Huang, Shaoyong Lu, Qiancheng Shen, Lu Zhang, Jian Zhang

J. Chem. Inf. Model., September, 2017

2016

ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks.

Qiancheng Shen, Guanqiao Wang, Shuai Li, Xinyi Liu, Shaoyong Lu, Zhongjie Chen, Kun Song, Junhao Yan, Lv Geng, Zhimin Huang, Wenkang Huang, Guoqiang Chen, Jian Zhang

Nucleic Acids Res., 2016

Alloscore: a method for predicting allosteric ligand-protein interactions.

Shuai Li, Qiancheng Shen, Minyi Su, Xinyi Liu, Shaoyong Lu, Zhongjie Chen, Renxiao Wang, Jian Zhang

Bioinform., 2016

ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions.

Luis N. Marenco, Rixin Wang, Robert A. McDougal, Tsviya Olender, Michal Twik, Elspeth A. Bruford, Xinyi Liu, Jian Zhang, Doron Lancet, Gordon M. Shepherd, Chiquito J. Crasto

Database J. Biol. Databases Curation, 2016

2015

ASBench: benchmarking sets for allosteric discovery.

Wenkang Huang, Guanqiao Wang, Qiancheng Shen, Xinyi Liu, Shaoyong Lu, Lv Geng, Zhimin Huang, Jian Zhang

Bioinform., 2015

2014

ASD v2.0: updated content and novel features focusing on allosteric regulation.

Zhimin Huang, Linkai Mou, Qiancheng Shen, Shaoyong Lu, Chuangang Li, Xinyi Liu, Guanqiao Wang, Shuai Li, Lv Geng, Yaqin Liu, Jiawei Wu, Guoqiang Chen, Jian Zhang

Nucleic Acids Res., 2014

2013

Allosite: a method for predicting allosteric sites.

Wenkang Huang, Shaoyong Lu, Zhimin Huang, Xinyi Liu, Linkai Mou, Yu Luo, Yanlong Zhao, Yaqin Liu, Zhongjie Chen, Tingjun Hou, Jian Zhang

Bioinform., 2013

2012

Insights into the Role of Magnesium Triad in <i>myo</i>-Inositol Monophosphatase: Metal Mechanism, Substrate Binding, and Lithium Therapy.

Shaoyong Lu, Wenkang Huang, Xiaobai Li, Zhimin Huang, Xinyi Liu, Yingyi Chen, Ting Shi, Jian Zhang

J. Chem. Inf. Model., 2012

2011

ASD: a comprehensive database of allosteric proteins and modulators.

Zhimin Huang, Liang Zhu, Yan Cao, Geng Wu, Xinyi Liu, Yingyi Chen, Qi Wang, Ting Shi, Yaxue Zhao, Yuefei Wang, Weihua Li, Yixue Li, Haifeng Chen, Guoqiang Chen, Jian Zhang

Nucleic Acids Res., 2011

ODORactor: a web server for deciphering olfactory coding.

Xinyi Liu, Xubo Su, Fei Wang, Zhimin Huang, Qi Wang, Zhen Li, Ruina Zhang, Lifang Wu, Yi Pan, Yingyi Chen, Hanyi Zhuang, Guoqiang Chen, Ting Shi, Jian Zhang

Bioinform., 2011