Yiannis N. Kaznessis

According to our database, Yiannis N. Kaznessis authored at least 18 papers between 2001 and 2018.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2018

Solving Stochastic Reaction Networks with Maximum Entropy Lagrange Multipliers.

Michail Vlysidis, Yiannis N. Kaznessis

Entropy, 2018

On Differences between Deterministic and Stochastic Models of Chemical Reactions: Schlögl Solved with ZI-Closure.

Michail Vlysidis, Yiannis N. Kaznessis

Entropy, 2018

A linearization method for probability moment equations.

Michail Vlysidis, Yiannis N. Kaznessis

Comput. Chem. Eng., 2018

2012

Stochastic simulations of a synthetic bacteria-yeast ecosystem.

Konstantinos Biliouris, David Babson, Claudia Schmidt-Dannert, Yiannis N. Kaznessis

BMC Syst. Biol., 2012

2011

Model reduction of multi-scale chemical Langevin equations.

Marie-Nathalie Contou-Carrere, Vassilios Sotiropoulos, Yiannis N. Kaznessis, Prodromos Daoutidis

Syst. Control. Lett., 2011

Stochastic simulations of the tetracycline operon.

Konstantinos Biliouris, Prodromos Daoutidis, Yiannis N. Kaznessis

BMC Syst. Biol., 2011

2010

SynBioSS designer: a web-based tool for the automated generation of kinetic models for synthetic biological constructs.

Emma M. B. Weeding, Jason Houle, Yiannis N. Kaznessis

Briefings Bioinform., 2010

2009

Model Reduction of Multiscale Chemical Langevin Equations: A Numerical Case Study.

Vassilios Sotiropoulos, Marie-Nathalie Contou-Carrere, Prodromos Daoutidis, Yiannis N. Kaznessis

IEEE ACM Trans. Comput. Biol. Bioinform., 2009

Poisson-Nernst-Planck Models of Nonequilibrium Ion Electrodiffusion through a Protegrin Transmembrane Pore.

Dan S. Bolintineanu, Abdallah Sayyed-Ahmad, H. Ted Davis, Yiannis N. Kaznessis

PLoS Comput. Biol., 2009

2008

SynBioSS: the synthetic biology modeling suite.

Anthony D. Hill, Jonathan R. Tomshine, Emma M. B. Weeding, Vassilios Sotiropoulos, Yiannis N. Kaznessis

Bioinform., 2008

Multiscale Models for Synthetic Biology.

Yiannis N. Kaznessis, Vassilios Sotiropoulos, Anthony D. Hill, Jonathan R. Tomshine, Katherine Volzing, John Barrett, Emma M. B. Weeding

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008

2007

Synthetic tetracycline-inducible regulatory networks: computer-aided design of dynamic phenotypes.

Vassilios Sotiropoulos, Yiannis N. Kaznessis

BMC Syst. Biol., 2007

Models for synthetic biology.

Yiannis N. Kaznessis

BMC Syst. Biol., 2007

2006

Residue Conservation Information for Generating near-native Structures in Protein-protein Docking.

Yuhua Duan, Boojala V. B. Reddy, Yiannis N. Kaznessis

J. Bioinform. Comput. Biol., 2006

Multiscale Hy3S: Hybrid stochastic simulation for supercomputers.

Howard M. Salis, Vassilios Sotiropoulos, Yiannis N. Kaznessis

BMC Bioinform., 2006

2005

A Quantitative Analysis of Interfacial Amino Acid Conservation in Protein-protein Hetero Complexes.

Boojala V. B. Reddy, Yiannis N. Kaznessis

J. Bioinform. Comput. Biol., 2005

Numerical simulation of stochastic gene circuits.

Howard M. Salis, Yiannis N. Kaznessis

Comput. Chem. Eng., 2005

2001

Prediction of blood-brain partitioning using Monte Carlo simulations of molecules in water.

Yiannis N. Kaznessis, Mark E. Snow, C. John Blankley

J. Comput. Aided Mol. Des., 2001