Yiheng Zhu

According to our database, Yiheng Zhu authored at least 11 papers between 2022 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

ProtFlow: Fast Protein Sequence Design via Flow Matching on Compressed Protein Language Model Embeddings.

Zitai Kong, Yiheng Zhu, Yinlong Xu, Hanjing Zhou, Mingzhe Yin, Jialu Wu, Hongxia Xu, Chang-Yu Hsieh, Tingjun Hou, Jian Wu

CoRR, April, 2025

Synergy of GFlowNet and Protein Language Model Makes a Diverse Antibody Designer.

Mingze Yin, Hanjing Zhou, Yiheng Zhu, Jialu Wu, Wei Wu, Mingyang Li, Kun Fu, Zheng Wang, Chang-Yu Hsieh, Tingjun Hou, Jian Wu

Proceedings of the AAAI-25, Sponsored by the Association for the Advancement of Artificial Intelligence, February 25, 2025

2024

S²ALM: Sequence-Structure Pre-trained Large Language Model for Comprehensive Antibody Representation Learning.

Mingze Yin, Hanjing Zhou, Jialu Wu, Yiheng Zhu, Yuxuan Zhan, Zitai Kong, Hongxia Xu, Chang-Yu Hsieh, Jintai Chen, Tingjun Hou, Jian Wu

CoRR, 2024

Structure-Enhanced Protein Instruction Tuning: Towards General-Purpose Protein Understanding.

Wei Wu, Chao Wang, Liyi Chen, Mingze Yin, Yiheng Zhu, Kun Fu, Jieping Ye, Hui Xiong, Zheng Wang

CoRR, 2024

Multi-Modal CLIP-Informed Protein Editing.

Mingze Yin, Hanjing Zhou, Yiheng Zhu, Miao Lin, Yixuan Wu, Jialu Wu, Hongxia Xu, Chang-Yu Hsieh, Tingjun Hou, Jintai Chen, Jian Wu

CoRR, 2024

Generative AI for Controllable Protein Sequence Design: A Survey.

Yiheng Zhu, Zitai Kong, Jialu Wu, Weize Liu, Yuqiang Han, Mingze Yin, Hongxia Xu, Chang-Yu Hsieh, Tingjun Hou

CoRR, 2024

Making Pre-trained Language Models Great on Tabular Prediction.

Jiahuan Yan, Bo Zheng, Hongxia Xu, Yiheng Zhu, Danny Z. Chen, Jimeng Sun, Jian Wu, Jintai Chen

Proceedings of the Twelfth International Conference on Learning Representations, 2024

2023

Sample-efficient Multi-objective Molecular Optimization with GFlowNets.

Yiheng Zhu, Jialu Wu, Chaowen Hu, Jiahuan Yan, Chang-Yu Hsieh, Tingjun Hou, Jian Wu

Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

GCL: Gradient-Guided Contrastive Learning for Medical Image Segmentation with Multi-Perspective Meta Labels.

Yixuan Wu, Jintai Chen, Jiahuan Yan, Yiheng Zhu, Danny Z. Chen, Jian Wu

Proceedings of the 31st ACM International Conference on Multimedia, 2023

MolHF: A Hierarchical Normalizing Flow for Molecular Graph Generation.

Yiheng Zhu, Zhenqiu Ouyang, Ben Liao, Jialu Wu, Yixuan Wu, Chang-Yu Hsieh, Tingjun Hou, Jian Wu

Proceedings of the Thirty-Second International Joint Conference on Artificial Intelligence, 2023

2022

TGSA: protein-protein association-based twin graph neural networks for drug response prediction with similarity augmentation.

Yiheng Zhu, Zhenqiu Ouyang, Wenbo Chen, Ruiwei Feng, Danny Z. Chen, Ji Cao, Jian Wu

Bioinform., 2022