Danny Ziyi Chen

According to our database, Danny Ziyi Chen authored at least 298 papers between 1989 and 2022.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of three.

2022

STNet: An End-to-End Generative Framework for Synthesizing Spatiotemporal Super-Resolution Volumes.

Jun Han, Hao Zheng, Danny Z. Chen, Chaoli Wang

IEEE Trans. Vis. Comput. Graph., 2022

Data-Driven Deep Supervision for Medical Image Segmentation.

Suraj Mishra, Yizhe Zhang, Danny Z. Chen, X. Sharon Hu

IEEE Trans. Medical Imaging, 2022

Discriminative Cervical Lesion Detection in Colposcopic Images With Global Class Activation and Local Bin Excitation.

Tingting Chen, Xuechen Liu, Ruiwei Feng, Wenzhe Wang, Chunnv Yuan, Weiguo Lu, Haizhen He, Honghao Gao, Haochao Ying, Danny Z. Chen, Jian Wu

IEEE J. Biomed. Health Informatics, 2022

HMCKRAutoEncoder: An Interpretable Deep Learning Framework for Time Series Analysis.

Jilong Wang, Rui Li, Renfa Li, Bin Fu, Danny Z. Chen

IEEE Trans. Emerg. Top. Comput., 2022

CMC-Net: 3D calf muscle compartment segmentation with sparse annotation.

Yaopeng Peng, Hao Zheng, Lichun Zhang, Milan Sonka, Danny Z. Chen

Medical Image Anal., 2022

Image Complexity Guided Network Compression for Biomedical Image Segmentation.

Suraj Mishra, Danny Z. Chen, X. Sharon Hu

ACM J. Emerg. Technol. Comput. Syst., 2022

Identifying Electrocardiogram Abnormalities Using a Handcrafted-Rule-Enhanced Neural Network.

Yuexin Bian, Jintai Chen, Xiaojun Chen, Xiaoxian Yang, Danny Z. Chen, Jian Wu

CoRR, 2022

H-EMD: A Hierarchical Earth Mover's Distance Method for Instance Segmentation.

Peixian Liang, Yizhe Zhang, Yifan Ding, Jianxu Chen, Chinedu S. Madukoma, Tim Weninger, Joshua D. Shrout, Danny Z. Chen

CoRR, 2022

D-Former: A U-shaped Dilated Transformer for 3D Medical Image Segmentation.

Yixuan Wu, Kuanlun Liao, Jintai Chen, Jinhong Wang, Danny Z. Chen, Honghao Gao, Jian Wu

CoRR, 2022

IMIIN: An inter-modality information interaction network for 3D multi-modal breast tumor segmentation.

Chengtao Peng, Yue Zhang, Jian Zheng, Bin Li, Jun Shen, Ming Li, Lei Liu, Bensheng Qiu, Danny Z. Chen

Comput. Medical Imaging Graph., 2022

TGSA: protein-protein association-based twin graph neural networks for drug response prediction with similarity augmentation.

Yiheng Zhu, Zhenqiu Ouyang, Wenbo Chen, Ruiwei Feng, Danny Z. Chen, Ji Cao, Jian Wu

Bioinform., 2022

Scalar2Vec: Translating Scalar Fields to Vector Fields via Deep Learning.

Pengfei Gu, Jun Han, Danny Z. Chen, Chaoli Wang

Proceedings of the 15th IEEE Pacific Visualization Symposium, 2022

2021

V2V: A Deep Learning Approach to Variable-to-Variable Selection and Translation for Multivariate Time-Varying Data.

Jun Han, Hao Zheng, Yunhao Xing, Danny Z. Chen, Chaoli Wang

IEEE Trans. Vis. Comput. Graph., 2021

Interactive Few-Shot Learning: Limited Supervision, Better Medical Image Segmentation.

Ruiwei Feng, Xiangshang Zheng, Tianxiang Gao, Jintai Chen, Wenzhe Wang, Danny Z. Chen, Jian Wu

IEEE Trans. Medical Imaging, 2021

KerNet: A Novel Deep Learning Approach for Keratoconus and Sub-Clinical Keratoconus Detection Based on Raw Data of the Pentacam HR System.

Ruiwei Feng, Zhe Xu, Xiangshang Zheng, Heping Hu, Xiuming Jin, Danny Z. Chen, Ke Yao, Jian Wu

IEEE J. Biomed. Health Informatics, 2021

A Deep Learning Approach for Colonoscopy Pathology WSI Analysis: Accurate Segmentation and Classification.

Ruiwei Feng, Xuechen Liu, Jintai Chen, Danny Z. Chen, Honghao Gao, Jian Wu

IEEE J. Biomed. Health Informatics, 2021

Towards Interpretable Arrhythmia Classification With Human-Machine Collaborative Knowledge Representation.

Jilong Wang, Rui Li, Renfa Li, Bin Fu, Chunxia Xiao, Danny Z. Chen

IEEE Trans. Biomed. Eng., 2021

A semi-supervised deep convolutional framework for signet ring cell detection.

Haochao Ying, Qingyu Song, Jintai Chen, Tingting Liang, Jingjing Gu, Fuzhen Zhuang, Danny Z. Chen, Jian Wu

Neurocomputing, 2021

Cascaded SE-ResUnet for segmentation of thoracic organs at risk.

Zheng Cao, Bohan Yu, Biwen Lei, Haochao Ying, Xiao Zhang, Danny Z. Chen, Jian Wu

Neurocomputing, 2021

DANets: Deep Abstract Networks for Tabular Data Classification and Regression.

Jintai Chen, Kuanlun Liao, Yao Wan, Danny Z. Chen, Jian Wu

CoRR, 2021

Influence-based Voronoi diagrams of clusters.

Ziyun Huang, Danny Z. Chen, Jinhui Xu

Comput. Geom., 2021

Reconstructing Unsteady Flow Data From Representative Streamlines via Diffusion and Deep-Learning-Based Denoising.

Pengfei Gu, Jun Han, Danny Z. Chen, Chaoli Wang

IEEE Computer Graphics and Applications, 2021

Hierarchical Self-supervised Learning for Medical Image Segmentation Based on Multi-domain Data Aggregation.

Hao Zheng, Jun Han, Hongxiao Wang, Lin Yang, Zhuo Zhao, Chaoli Wang, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

kCBAC-Net: Deeply Supervised Complete Bipartite Networks with Asymmetric Convolutions for Medical Image Segmentation.

Pengfei Gu, Hao Zheng, Yizhe Zhang, Chaoli Wang, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Objective-Dependent Uncertainty Driven Retinal Vessel Segmentation.

Suraj Mishra, Danny Z. Chen, X. Sharon Hu

Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

Electrocardio Panorama: Synthesizing New ECG views with Self-supervision.

Jintai Chen, Xiangshang Zheng, Hongyun Yu, Danny Z. Chen, Jian Wu

Proceedings of the Thirtieth International Joint Conference on Artificial Intelligence, 2021

A Receptor Skeleton for Capsule Neural Networks.

Jintai Chen, Hongyun Yu, Chengde Qian, Danny Z. Chen, Jian Wu

Proceedings of the 38th International Conference on Machine Learning, 2021

INVITED: kCC-Net for Compression of Biomedical Image Segmentation Networks.

Suraj Mishra, Danny Z. Chen, X. Sharon Hu

Proceedings of the 58th ACM/IEEE Design Automation Conference, 2021

AGMI: Attention-Guided Multi-omics Integration for Drug Response Prediction with Graph Neural Networks.

Ruiwei Feng, Yufeng Xie, Minshan Lai, Danny Z. Chen, Ji Cao, Jian Wu

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2020

AntVis: A web-based visual analytics tool for exploring ant movement data.

Tianxiao Hu, Hao Zheng, Chen Liang, Sirou Zhu, Natalie Imirzian, Yizhe Zhang, Chaoli Wang, David P. Hughes, Danny Z. Chen

Vis. Informatics, 2020

A Cross-Domain Metal Trace Restoring Network for Reducing X-Ray CT Metal Artifacts.

Chengtao Peng, Bin Li, Peixian Liang, Jian Zheng, Yizhe Zhang, Bensheng Qiu, Danny Z. Chen

IEEE Trans. Medical Imaging, 2020

Globally Optimal Segmentation of Mutually Interacting Surfaces using Deep Learning.

Hui Xie, Zhe Pan, Leixin Zhou, Fahim A. Zaman, Danny Ziyi Chen, Jost B. Jonas, Yaxing Wang, Xiaodong Wu

CoRR, 2020

Cartilage Segmentation in High-Resolution 3D Micro-CT Images via Uncertainty-Guided Self-training with Very Sparse Annotation.

Hao Zheng, Susan M. Motch Perrine, M. Kathleen Pitirri, Kazuhiko Kawasaki, Chaoli Wang, Joan T. Richtsmeier, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Dual-Level Selective Transfer Learning for Intrahepatic Cholangiocarcinoma Segmentation in Non-enhanced Abdominal CT.

Wenzhe Wang, Qingyu Song, Jiarong Zhou, Ruiwei Feng, Tingting Chen, Wenhao Ge, Danny Z. Chen, S. Kevin Zhou, Weilin Wang, Jian Wu

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Doctor Imitator: A Graph-Based Bone Age Assessment Framework Using Hand Radiographs.

Jintai Chen, Bohan Yu, Biwen Lei, Ruiwei Feng, Danny Z. Chen, Jian Wu

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

A Fully 3D Cascaded Framework for Pancreas Segmentation.

Wenzhe Wang, Qingyu Song, Ruiwei Feng, Tingting Chen, Jintai Chen, Danny Z. Chen, Jian Wu

Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

A Data-Aware Deep Supervised Method for Retinal Vessel Segmentation.

Suraj Mishra, Danny Z. Chen, Xiaobo Sharon Hu

Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

SSN: A Stair-Shape Network for Real-Time Polyp Segmentation in Colonoscopy Images.

Ruiwei Feng, Biwen Lei, Wenzhe Wang, Tingting Chen, Jintai Chen, Danny Z. Chen, Jian Wu

Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

Visual Relationship Detection With A Deep Convolutional Relationship Network.

Yaopeng Peng, Danny Z. Chen, Lanfen Lin

Proceedings of the IEEE International Conference on Image Processing, 2020

A Hierarchical Graph Network for 3D Object Detection on Point Clouds.

Jintai Chen, Biwen Lei, Qingyu Song, Haochao Ying, Danny Z. Chen, Jian Wu

Proceedings of the 2020 IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2020

A Coarse-to-Fine Data Generation Method for 2D and 3D Cell Nucleus Segmentation.

Zhuo Zhao, Hongxiao Wang, Yizhe Zhang, Hao Zheng, Siyuan Zhang, Danny Ziyi Chen

Proceedings of the 33rd IEEE International Symposium on Computer-Based Medical Systems, 2020

InTracker: An Integrated Detector-Tracker Framework for Cell Detection and Tracking.

Peixian Liang, Jianxu Chen, Yizhe Zhang, Hongxiao Wang, Hao Zheng, Pengfei Gu, Danny Ziyi Chen

Proceedings of the 33rd IEEE International Symposium on Computer-Based Medical Systems, 2020

Unlabeled Data Guided Semi-supervised Histopathology Image Segmentation.

Hongxiao Wang, Hao Zheng, Jianxu Chen, Lin Yang, Yizhe Zhang, Danny Z. Chen

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

Flow-Mixup: Classifying Multi-labeled Medical Images with Corrupted Labels.

Jintai Chen, Hongyun Yu, Ruiwei Feng, Danny Z. Chen, Jian Wu

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

SSR-VFD: Spatial Super-Resolution for Vector Field Data Analysis and Visualization.

Li Guo, Shaojie Ye, Jun Han, Hao Zheng, Han Gao, Danny Z. Chen, Jian-Xun Wang, Chaoli Wang

Proceedings of the 2020 IEEE Pacific Visualization Symposium, 2020

An Annotation Sparsification Strategy for 3D Medical Image Segmentation via Representative Selection and Self-Training.

Hao Zheng, Yizhe Zhang, Lin Yang, Chaoli Wang, Danny Z. Chen

Proceedings of the Thirty-Fourth AAAI Conference on Artificial Intelligence, 2020

2019

moDNN: Memory Optimal Deep Neural Network Training on Graphics Processing Units.

Xiaoming Chen, Danny Ziyi Chen, Yinhe Han, Xiaobo Sharon Hu

IEEE Trans. Parallel Distributed Syst., 2019

Flow Field Reduction Via Reconstructing Vector Data From 3-D Streamlines Using Deep Learning.

Jun Han, Jun Tao, Hao Zheng, Hanqi Guo, Danny Z. Chen, Chaoli Wang

IEEE Computer Graphics and Applications, 2019

Computing L₁ Shortest Paths Among Polygonal Obstacles in the Plane.

Danny Z. Chen, Haitao Wang

Algorithmica, 2019

Nodule-Plus R-CNN and Deep Self-Paced Active Learning for 3D Instance Segmentation of Pulmonary Nodules.

Wenzhe Wang, Ruiwei Feng, Jintai Chen, Yifei Lu, Tingting Chen, Hongyun Yu, Danny Z. Chen, Jian Wu

IEEE Access, 2019

SPDA: Superpixel-based Data Augmentation for Biomedical Image Segmentation.

Yizhe Zhang, Lin Yang, Hao Zheng, Peixian Liang, Colleen Mangold, Raquel G. Loreto, David P. Hughes, Danny Z. Chen

Proceedings of the International Conference on Medical Imaging with Deep Learning, 2019

HFA-Net: 3D Cardiovascular Image Segmentation with Asymmetrical Pooling and Content-Aware Fusion.

Hao Zheng, Lin Yang, Jun Han, Yizhe Zhang, Peixian Liang, Zhuo Zhao, Chaoli Wang, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Decompose-and-Integrate Learning for Multi-class Segmentation in Medical Images.

Yizhe Zhang, Michael T. C. Ying, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

LSRC: A Long-Short Range Context-Fusing Framework for Automatic 3D Vertebra Localization.

Jintai Chen, Yanjie Wang, Ruoqian Guo, Bohan Yu, Tingting Chen, Wenzhe Wang, Ruiwei Feng, Danny Z. Chen, Jian Wu

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Multi-view Learning with Feature Level Fusion for Cervical Dysplasia Diagnosis.

Tingting Chen, Xinjun Ma, Xuechen Liu, Wenzhe Wang, Ruiwei Feng, Jintai Chen, Chunnv Yuan, Weiguo Lu, Danny Z. Chen, Jian Wu

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

CC-NET: Image Complexity Guided Network Compression for Biomedical Image Segmentation.

Suraj Mishra, Peixian Liang, Adam Czajka, Danny Z. Chen, Xiaobo Sharon Hu

Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

Cascade Decoder: A Universal Decoding Method For Biomedical Image Segmentation.

Peixian Liang, Jianxu Chen, Hao Zheng, Lin Yang, Yizhe Zhang, Danny Z. Chen

Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

Multi-Modal Fusion Learning For Cervical Dysplasia Diagnosis.

Tingting Chen, Xinjun Ma, Xingde Ying, Wenzhe Wang, Chunnv Yuan, Weiguo Lu, Danny Z. Chen, Jian Wu

Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

A New Ensemble Learning Framework for 3D Biomedical Image Segmentation.

Hao Zheng, Yizhe Zhang, Lin Yang, Peixian Liang, Zhuo Zhao, Chaoli Wang, Danny Z. Chen

Proceedings of the Thirty-Third AAAI Conference on Artificial Intelligence, 2019

Biomedical Image Segmentation via Representative Annotation.

Hao Zheng, Lin Yang, Jianxu Chen, Jun Han, Yizhe Zhang, Peixian Liang, Zhuo Zhao, Chaoli Wang, Danny Z. Chen

Proceedings of the Thirty-Third AAAI Conference on Artificial Intelligence, 2019

2018

Online scheduling of moldable parallel tasks.

Deshi Ye, Danny Z. Chen, Guochuan Zhang

J. Sched., 2018

Inversion detection using PacBio long reads.

Shenglong Zhu, Scott J. Emrich, Danny Z. Chen

Int. J. Data Min. Bioinform., 2018

BoxNet: Deep Learning Based Biomedical Image Segmentation Using Boxes Only Annotation.

Lin Yang, Yizhe Zhang, Zhuo Zhao, Hao Zheng, Peixian Liang, Michael T. C. Ying, Anil T. Ahuja, Danny Z. Chen

CoRR, 2018

Deep Learning Based Instance Segmentation in 3D Biomedical Images Using Weak Annotation.

Zhuo Zhao, Lin Yang, Hao Zheng, Ian H. Guldner, Siyuan Zhang, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Deep Active Self-paced Learning for Accurate Pulmonary Nodule Segmentation.

Wenzhe Wang, Yifei Lu, Bian Wu, Tingting Chen, Danny Z. Chen, Jian Wu

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

A Framework for Identifying Diabetic Retinopathy Based on Anti-noise Detection and Attention-Based Fusion.

Zhiwen Lin, Ruoqian Guo, Yanjie Wang, Bian Wu, Tingting Chen, Wenzhe Wang, Danny Z. Chen, Jian Wu

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

A new registration approach for dynamic analysis of calcium signals in organs.

Peixian Liang, Jianxu Chen, Pavel A. Brodskiy, Qinfeng Wu, Yejia Zhang, Yizhe Zhang, Lin Yang, Jeremiah J. Zartman, Danny Z. Chen

Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018

moDNN: Memory optimal DNN training on GPUs.

Xiaoming Chen, Danny Z. Chen, Xiaobo Sharon Hu

Proceedings of the 2018 Design, Automation & Test in Europe Conference & Exhibition, 2018

Quantization of Fully Convolutional Networks for Accurate Biomedical Image Segmentation.

Xiaowei Xu, Qing Lu, Lin Yang, Xiaobo Sharon Hu, Danny Z. Chen, Yu Hu, Yiyu Shi

Proceedings of the 2018 IEEE Conference on Computer Vision and Pattern Recognition, 2018

Biomedical Image Segmentation Using Fully Convolutional Networks on TrueNorth.

Indranil Palit, Lin Yang, Yue Ma, Danny Z. Chen, Michael T. Niemier, Jinjun Xiong, Xiaobo Sharon Hu

Proceedings of the 31st IEEE International Symposium on Computer-Based Medical Systems, 2018

Predicting Local Inversions Using Rectangle Clustering and Representative Rectangle Prediction.

Shenglong Zhu, Scott J. Emrich, Danny Z. Chen

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017

On Clustering Induced Voronoi Diagrams.

Danny Z. Chen, Ziyun Huang, Yangwei Liu, Jinhui Xu

SIAM J. Comput., 2017

Computing the Visibility Polygon of an Island in a Polygonal Domain.

Danny Z. Chen, Haitao Wang

Algorithmica, 2017

Deep Adversarial Networks for Biomedical Image Segmentation Utilizing Unannotated Images.

Yizhe Zhang, Lin Yang, Jianxu Chen, Maridel Fredericksen, David P. Hughes, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Suggestive Annotation: A Deep Active Learning Framework for Biomedical Image Segmentation.

Lin Yang, Yizhe Zhang, Jianxu Chen, Siyuan Zhang, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Fast Background Removal Method for 3D Multi-channel Deep Tissue Fluorescence Imaging.

Chenchen Li, Xiaowei Li, Hongji Cao, He Jiang, Xiaotie Deng, Danny Z. Chen, Lin Yang, Zhifeng Shao

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Neuron Segmentation Using Deep Complete Bipartite Networks.

Jianxu Chen, Sreya Banerjee, Abhinav Grama, Walter J. Scheirer, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Optimizing Memory Efficiency for Convolution Kernels on Kepler GPUs.

Xiaoming Chen, Jianxu Chen, Danny Z. Chen, Xiaobo Sharon Hu

Proceedings of the 54th Annual Design Automation Conference, 2017

2016

Sphere Packing Problem.

Danny Z. Chen

Encyclopedia of Algorithms, 2016

A Hybrid Approach for Segmentation and Tracking of Myxococcus Xanthus Swarms.

Jianxu Chen, Mark S. Alber, Danny Ziyi Chen

IEEE Trans. Medical Imaging, 2016

Iris Recognition Based on Human-Interpretable Features.

Jianxu Chen, Feng Shen, Danny Ziyi Chen, Patrick J. Flynn

IEEE Trans. Inf. Forensics Secur., 2016

Shell: A Spatial Decomposition Data Structure for Ray Traversal on GPU.

Kai Xiao, Xiaobo Sharon Hu, Bo Zhou, Danny Ziyi Chen

IEEE Trans. Computers, 2016

A seeding-searching-ensemble method for gland segmentation in H&E-stained images.

Yizhe Zhang, Lin Yang, John D. MacKenzie, Rageshree Ramachandran, Danny Z. Chen

BMC Medical Informatics Decis. Mak., 2016

Two-point L1 shortest path queries in the plane.

Danny Z. Chen, Rajasekhar Inkulu, Haitao Wang

J. Comput. Geom., 2016

Matroid and Knapsack Center Problems.

Danny Z. Chen, Jian Li, Hongyu Liang, Haitao Wang

Algorithmica, 2016

Combining Fully Convolutional and Recurrent Neural Networks for 3D Biomedical Image Segmentation.

Jianxu Chen, Lin Yang, Yizhe Zhang, Mark S. Alber, Danny Ziyi Chen

Proceedings of the Advances in Neural Information Processing Systems 29: Annual Conference on Neural Information Processing Systems 2016, 2016

3D Segmentation of Glial Cells Using Fully Convolutional Networks and k-Terminal Cut.

Lin Yang, Yizhe Zhang, Ian H. Guldner, Siyuan Zhang, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

A Deep Learning Approach for Semantic Segmentation in Histology Tissue Images.

Jiazhuo Wang, John D. MacKenzie, Rageshree Ramachandran, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Segmentation and tracking of Pseudomonas aeruginosa for cell dynamics analysis in time-lapse images.

Jianxu Chen, Yiqing Cai, Chen Wei, Lin Yang, Mark S. Alber, Danny Ziyi Chen

Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

Single molecule sequencing-guided scaffolding and correction of draft assemblies.

Shenglong Zhu, Danny Z. Chen, Scott J. Emrich

Proceedings of the 6th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2016

Coarse-to-Fine Stacked Fully Convolutional Nets for lymph node segmentation in ultrasound images.

Yizhe Zhang, Michael T. C. Ying, Lin Yang, Anil T. Ahuja, Danny Z. Chen

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

2015

Efficient algorithms for the one-dimensional k-center problem.

Danny Ziyi Chen, Jian Li, Haitao Wang

Theor. Comput. Sci., 2015

A circular matrix-merging algorithm with application in Volumetric Intensity-Modulated Arc Therapy.

Danny Z. Chen, David Craft, Lin Yang

Theor. Comput. Sci., 2015

Computing Shortest Paths among Curved Obstacles in the Plane.

Danny Z. Chen, Haitao Wang

ACM Trans. Algorithms, 2015

A new algorithm for computing visibility graphs of polygonal obstacles in the plane.

Danny Z. Chen, Haitao Wang

J. Comput. Geom., 2015

Packing cubes into a cube is NP-complete in the strong sense.

Yiping Lu, Danny Z. Chen, Jianzhong Cha

J. Comb. Optim., 2015

Computing maximum non-crossing matching in convex bipartite graphs.

Danny Ziyi Chen, Xiaomin Liu, Haitao Wang

Discret. Appl. Math., 2015

Weak visibility queries of line segments in simple polygons.

Danny Ziyi Chen, Haitao Wang

Comput. Geom., 2015

Visibility and ray shooting queries in polygonal domains.

Danny Z. Chen, Haitao Wang

Comput. Geom., 2015

A two-layer structure prediction framework for microscopy cell detection.

Yan Xu, Weiying Wu, Eric I-Chao Chang, Danny Ziyi Chen, Jian Mu, Peter P. Lee, Kim R. M. Blenman, Zhuowen Tu

Comput. Medical Imaging Graph., 2015

Optimal Point Movement for Covering Circular Regions.

Danny Ziyi Chen, Xuehou Tan, Haitao Wang, Gangshan Wu

Algorithmica, 2015

Segmentation of vascular structures and hematopoietic cells in 3D microscopy images and quantitative analysis.

Jian Mu, Lin Yang, Malgorzata M. Kamocka, Amy L. Zollman, Nadia Carlesso, Danny Z. Chen

Proceedings of the Medical Imaging 2015: Image Processing, 2015

Fast Background Removal in 3D Fluorescence Microscopy Images Using One-Class Learning.

Lin Yang, Yizhe Zhang, Ian H. Guldner, Siyuan Zhang, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference Munich, Germany, October 5, 2015

Neutrophils Identification by Deep Learning and Voronoi Diagram of Clusters.

Jiazhuo Wang, John D. MacKenzie, Rageshree Ramachandran, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference Munich, Germany, October 5, 2015

Detection of Glands and Villi by Collaboration of Domain Knowledge and Deep Learning.

Jiazhuo Wang, John D. MacKenzie, Rageshree Ramachandran, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, 2015

A Hybrid Approach for Segmentation and Tracking of Myxococcus Xanthus Swarms.

Jianxu Chen, Shant Mahserejian, Mark S. Alber, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference Munich, Germany, October 5, 2015

Segmenting subcellular structures in histology tissue images.

Jiazhuo Wang, John D. MacKenzie, Rageshree Ramachandran, Yizhe Zhang, Haitao Wang, Danny Ziyi Chen

Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

An optimization-based approach for restoring missing structures and textures in images.

Jian Mu, Danny Z. Chen

Proceedings of the 2015 IEEE International Conference on Image Processing, 2015

Monte Carlo Based Ray Tracing in CPU-GPU Heterogeneous Systems and Applications in Radiation Therapy.

Kai Xiao, Danny Ziyi Chen, Xiaobo Sharon Hu, Bo Zhou

Proceedings of the 24th International Symposium on High-Performance Parallel and Distributed Computing, 2015

Packing Cubes into a Cube in (D>3)-Dimensions.

Yiping Lu, Danny Z. Chen, Jianzhong Cha

Proceedings of the Computing and Combinatorics - 21st International Conference, 2015

A seeding-searching-ensemble method for gland segmentation and detection.

Yizhe Zhang, Lin Yang, John D. MacKenzie, Rageshree Ramachandran, Danny Z. Chen

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014

Two-Point L₁ Shortest Path Queries in the Plane.

Danny Z. Chen, Rajasekhar Inkulu, Haitao Wang

CoRR, 2014

Outlier Respecting Points Approximation.

Danny Z. Chen, Haitao Wang

Algorithmica, 2014

New Algorithms for Facility Location Problems on the Real Line.

Danny Z. Chen, Haitao Wang

Algorithmica, 2014

Identifying Neutrophils in H&E Staining Histology Tissue Images.

Jiazhuo Wang, John D. MacKenzie, Rageshree Ramachandran, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

A Matching Model Based on Earth Mover's Distance for Tracking Myxococcus Xanthus.

Jianxu Chen, Cameron W. Harvey, Mark S. Alber, Danny Ziyi Chen

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

A Circular Matrix-Merging Algorithm with Application in VMAT Radiation Therapy.

Danny Z. Chen, David Craft, Lin Yang

Proceedings of the Frontiers in Algorithmics - 8th International Workshop, 2014

An Automated Approach for Fibrin Network Segmentation and Structure Identification in 3D Confocal Microscopy Images.

Jianxu Chen, Oleg V. Kim, Rustem I. Litvinov, John W. Weisel, Mark S. Alber, Danny Ziyi Chen

Proceedings of the 2014 IEEE 27th International Symposium on Computer-Based Medical Systems, 2014

2013

Optimal Graph Search Based Segmentation of Airway Tree Double Surfaces Across Bifurcations.

Xiaomin Liu, Danny Z. Chen, Merryn H. Tawhai, Xiaodong Wu, Eric A. Hoffman, Milan Sonka

IEEE Trans. Medical Imaging, 2013

GPU-optimized volume ray tracing for massive numbers of rays in radiotherapy.

Bo Zhou, Kai Xiao, Danny Z. Chen, Xiaobo Sharon Hu

ACM Trans. Embed. Comput. Syst., 2013

Accelerating radiation dose calculation: A multi-FPGA solution.

Bo Zhou, Xiaobo Sharon Hu, Danny Z. Chen, Cedric X. Yu

ACM Trans. Embed. Comput. Syst., 2013

Algorithms for interval structures with applications.

Danny Z. Chen, Ewa Misiolek

Theor. Comput. Sci., 2013

Computing Shortest Paths amid Convex Pseudodisks.

Danny Z. Chen, John Hershberger, Haitao Wang

SIAM J. Comput., 2013

The topology aware file distribution problem.

Shawn T. O'Neil, Amitabh Chaudhary, Danny Z. Chen, Haitao Wang

J. Comb. Optim., 2013

A note on searching line arrangements and applications.

Danny Z. Chen, Haitao Wang

Inf. Process. Lett., 2013

Algorithms on Minimizing the Maximum Sensor Movement for Barrier Coverage of a Linear Domain.

Danny Z. Chen, Yan Gu, Jian Li, Haitao Wang

Discret. Comput. Geom., 2013

Efficient Algorithms for One-Dimensional k-Center Problems

Danny Z. Chen, Jian Li, Haitao Wang

CoRR, 2013

Approximating Points by a Piecewise Linear Function.

Danny Z. Chen, Haitao Wang

Algorithmica, 2013

L_1 Shortest Path Queries among Polygonal Obstacles in the Plane.

Danny Z. Chen, Haitao Wang

Proceedings of the 30th International Symposium on Theoretical Aspects of Computer Science, 2013

Shell: A Spatial Decomposition Data Structure for 3D Curve Traversal on Many-Core Architectures.

Kai Xiao, Danny Ziyi Chen, Xiaobo Sharon Hu, Bo Zhou

Proceedings of the Algorithms - ESA 2013, 2013

Packing Cubes into a Cube Is NP-Hard in the Strong Sense.

Yiping Lu, Danny Z. Chen, Jianzhong Cha

Proceedings of the Computing and Combinatorics, 19th International Conference, 2013

GPU acceleration of Data Assembly in Finite Element Methods and its energy implications.

Li Tang, Xiaobo Sharon Hu, Danny Z. Chen, Michael T. Niemier, Richard F. Barrett, Simon D. Hammond, Genie Hsieh

Proceedings of the 24th International Conference on Application-Specific Systems, 2013

2012

Energy Minimization for Multiprocessor Systems Executing Real-Time Tasks.

Yumin Zhang, Xiaobo Sharon Hu, Danny Ziyi Chen

Proceedings of the Handbook of Energy-Aware and Green Computing - Two Volume Set., 2012

Computing feasible toolpaths for 5-axis machines.

Danny Z. Chen, Ewa Misiolek

Theor. Comput. Sci., 2012

Flattening topologically spherical surface.

Danny Z. Chen, Ewa Misiolek

J. Comb. Optim., 2012

Locating an obnoxious Line among Planar Objects.

Danny Z. Chen, Haitao Wang

Int. J. Comput. Geom. Appl., 2012

Fitting a Step Function to a Point Set with Outliers Based on Simplicial thickness Data Structures.

Danny Z. Chen, Haitao Wang

Int. J. Comput. Geom. Appl., 2012

Computing L1 Shortest Paths among Polygonal Obstacles in the Plane

Danny Z. Chen, Haitao Wang

CoRR, 2012

An improved algorithm for reconstructing a simple polygon from its visibility angles.

Danny Z. Chen, Haitao Wang

Comput. Geom., 2012

Automatic segmentation and analysis of fibrin networks in 3D confocal microscopy images.

Xiaomin Liu, Jian Mu, Kellie R. Machlus, Alisa S. Wolberg, Elliot D. Rosen, Zhiliang Xu, Mark S. Alber, Danny Z. Chen

Proceedings of the Medical Imaging 2012: Image Processing, 2012

Detecting and Tracking Motion of Myxococcus xanthus Bacteria in Swarms.

Xiaomin Liu, Cameron W. Harvey, Haitao Wang, Mark S. Alber, Danny Z. Chen

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

2011

Online rectangle filling.

Haitao Wang, Amitabh Chaudhary, Danny Z. Chen

Theor. Comput. Sci., 2011

Improved algorithms for path partition and related problems.

Danny Z. Chen, Haitao Wang

Oper. Res. Lett., 2011

New algorithms for online rectangle filling with <i>k</i>-lookahead.

Haitao Wang, Amitabh Chaudhary, Danny Z. Chen

J. Comb. Optim., 2011

Processing an Offline Insertion-Query Sequence with Applications.

Danny Z. Chen, Haitao Wang

Int. J. Found. Comput. Sci., 2011

Free-Form Surface Partition in 3-d.

Danny Z. Chen, Ewa Misiolek

Int. J. Comput. Geom. Appl., 2011

Representing a Functional Curve by Curves with Fewer Peaks.

Danny Z. Chen, Chao Wang, Haitao Wang

Discret. Comput. Geom., 2011

Coupled Path Planning, Region Optimization, and Applications in Intensity-modulated Radiation Therapy.

Danny Z. Chen, Shuang Luan, Chao Wang

Algorithmica, 2011

A New Algorithm for a Field Splitting Problem in Intensity-Modulated Radiation Therapy.

Danny Z. Chen, Konrad Engel, Chao Wang

Algorithmica, 2011

Shape Rectangularization Problems in Intensity-Modulated Radiation Therapy.

Nikhil Bansal, Danny Z. Chen, Don Coppersmith, Xiaobo Sharon Hu, Shuang Luan, Ewa Misiolek, Baruch Schieber, Chao Wang

Algorithmica, 2011

New Algorithms for 1-D Facility Location and Path Equipartition Problems.

Danny Z. Chen, Haitao Wang

Proceedings of the Algorithms and Data Structures - 12th International Symposium, 2011

Computing Shortest Paths amid Pseudodisks.

Danny Z. Chen, Haitao Wang

Proceedings of the Twenty-Second Annual ACM-SIAM Symposium on Discrete Algorithms, 2011

Memory-efficient volume ray tracing on GPU for radiotherapy.

Bo Zhou, Xiaobo Sharon Hu, Danny Z. Chen

Proceedings of the IEEE 9th Symposium on Application Specific Processors, 2011

Segmentation of knee joints in x-ray images using decomposition-based sweeping and graph search.

Jian Mu, Xiaomin Liu, Shuang Luan, Philip H. Heintz, Gary W. Mlady, Danny Z. Chen

Proceedings of the Medical Imaging 2011: Image Processing, 2011

Identification and classification of cells in multispectral microscopy images of lymph nodes.

Xiaomin Liu, Alvernia F. Setiadi, Mark S. Alber, Peter P. Lee, Danny Z. Chen

Proceedings of the Medical Imaging 2011: Image Processing, 2011

Collapsed-cone based deformation field regularization for nonrigid image registration.

Bo Zhou, Cedric X. Yu, Andrew Godley, X. Allen Li, Xiaobo Sharon Hu, Danny Z. Chen

Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

An Improved Algorithm for Reconstructing a Simple Polygon from the Visibility Angles.

Danny Z. Chen, Haitao Wang

Proceedings of the Algorithms and Computation - 22nd International Symposium, 2011

Efficient Algorithms for the Weighted k-Center Problem on a Real Line.

Danny Z. Chen, Haitao Wang

Proceedings of the Algorithms and Computation - 22nd International Symposium, 2011

A Nearly Optimal Algorithm for Finding L 1 Shortest Paths among Polygonal Obstacles in the Plane.

Danny Z. Chen, Haitao Wang

Proceedings of the Algorithms - ESA 2011, 2011

2010

Finding Many Optimal Paths without Growing any Optimal Path Trees.

Danny Z. Chen, Ewa Misiolek

Int. J. Comput. Geom. Appl., 2010

Segmentation, Reconstruction, and Analysis of Blood Thrombus Formation in 3D 2-Photon Microscopy Images.

Jian Mu, Xiaomin Liu, Malgorzata M. Kamocka, Zhiliang Xu, Mark S. Alber, Elliot D. Rosen, Danny Z. Chen

EURASIP J. Adv. Signal Process., 2010

Densest <i>k</i>-Subgraph Approximation on Intersection Graphs.

Danny Z. Chen, Rudolf Fleischer, Jian Li

Proceedings of the Approximation and Online Algorithms - 8th International Workshop, 2010

Improved Points Approximation Algorithms Based on Simplicial Thickness Data Structures.

Danny Z. Chen, Haitao Wang

Proceedings of the Combinatorial Algorithms - 21st International Workshop, 2010

Computing Toolpaths for 5-Axis NC Machines.

Danny Z. Chen, Ewa Misiolek

Proceedings of the Combinatorial Optimization and Applications, 2010

2009

Geometric Algorithms for the Constrained 1-d k-Means Clustering Problems and IMRT Applications.

Danny Z. Chen, Mark A. Healy, Chao Wang, Bin Xu

Int. J. Found. Comput. Sci., 2009

Editors' Foreword.

Danny Z. Chen, D. T. Lee

Int. J. Comput. Geom. Appl., 2009

Guest Editors' Forward.

Danny Z. Chen, D. T. Lee

Algorithmica, 2009

A multi-FPGA accelerator for radiation dose calculation in cancer treatment.

Bo Zhou, Xiaobo Sharon Hu, Danny Z. Chen, Cedric X. Yu

Proceedings of the IEEE 7th Symposium on Application Specific Processors, 2009

Optimal graph search based image segmentation for objects with complex topologies.

Xiaomin Liu, Danny Z. Chen, Xiaodong Wu, Milan Sonka

Proceedings of the Medical Imaging 2009: Image Processing, 2009

Approximating Points by a Piecewise Linear Function: II. Dealing with Outliers.

Danny Z. Chen, Haitao Wang

Proceedings of the Algorithms and Computation, 20th International Symposium, 2009

Approximating Points by a Piecewise Linear Function: I.

Danny Z. Chen, Haitao Wang

Proceedings of the Algorithms and Computation, 20th International Symposium, 2009

Segmentation, reconstruction, and analysis of blood thrombi in 2-photon microscopy images.

Jian Mu, Xiaomin Liu, Malgorzata M. Kamocka, Zhiliang Xu, Mark S. Alber, Elliot D. Rosen, Danny Z. Chen

Proceedings of the Twenty-Second IEEE International Symposium on Computer-Based Medical Systems, 2009

2008

Sphere Packing Problem.

Danny Z. Chen

Proceedings of the Encyclopedia of Algorithms - 2008 Edition, 2008

Mountain Reduction, Block Matching, and Applications in Intensity-Modulated Radiation Therapy.

Danny Z. Chen, Xiaobo Sharon Hu, Chao Wang, Shuang Luan, Xiaodong Wu

Int. J. Comput. Geom. Appl., 2008

Optimal Field Splitting, with Applications in Intensity-Modulated Radiation Therapy.

Danny Z. Chen, Chao Wang

Proceedings of the Frontiers in Algorithmics, Second Annual International Workshop, 2008

Optimal Surface Flattening.

Danny Z. Chen, Ewa Misiolek

Proceedings of the Frontiers in Algorithmics, Second Annual International Workshop, 2008

Stabbing Convex Polygons with a Segment or a Polygon.

Pankaj K. Agarwal, Danny Z. Chen, Shashidhara K. Ganjugunte, Ewa Misiolek, Micha Sharir, Kai Tang

Proceedings of the Algorithms, 2008

New Algorithms for Online Rectangle Filling with k-Lookahead.

Haitao Wang, Amitabh Chaudhary, Danny Z. Chen

Proceedings of the Computing and Combinatorics, 14th Annual International Conference, 2008

2007

Sphere Packing and Medical Applications.

Danny Z. Chen, Jinhui Xu

Proceedings of the Handbook of Approximation Algorithms and Metaheuristics., 2007

Predicting Protein-Protein Interactions from Protein Domains Using a Set Cover Approach.

Chengbang Huang, Faruck Morcos, Simon P. Kanaan, Stefan Wuchty, Danny Z. Chen, Jesús A. Izaguirre

IEEE ACM Trans. Comput. Biol. Bioinform., 2007

Fabricatable Interconnect and Molecular QCA Circuits.

Amitabh Chaudhary, Danny Z. Chen, Xiaobo Sharon Hu, Michael T. Niemier, Ramprasad Ravichandran, Kevin Whitton

IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2007

The Layered Net Surface Problems in Discrete Geometry and Medical Image Segmentation.

Xiaodong Wu, Danny Z. Chen, Kang Li, Milan Sonka

Int. J. Comput. Geom. Appl., 2007

Approximating the Maximum Sharing Problem.

Amitabh Chaudhary, Danny Z. Chen, Rudolf Fleischer, Xiaobo Sharon Hu, Jian Li, Michael T. Niemier, Zhiyi Xie, Hong Zhu

Proceedings of the Algorithms and Data Structures, 10th International Workshop, 2007

Density-Based Data Clustering Algorithms for Lower Dimensions Using Space-Filling Curves.

Bin Xu, Danny Z. Chen

Proceedings of the Advances in Knowledge Discovery and Data Mining, 2007

Geometric Algorithms for the Constrained 1-D <i>K</i> -Means Clustering Problems and IMRT Applications.

Danny Z. Chen, Mark A. Healy, Chao Wang, Bin Xu

Proceedings of the Frontiers in Algorithmics, First Annual International Workshop, 2007

A New Field Splitting Algorithm for Intensity-Modulated Radiation Therapy.

Danny Z. Chen, Mark A. Healy, Chao Wang, Xiaodong Wu

Proceedings of the Computing and Combinatorics, 13th Annual International Conference, 2007

Hardware Acceleration for 3-D Radiation Dose Calculation.

Bo Zhou, Xiaobo Sharon Hu, Danny Z. Chen, Cedric X. Yu

Proceedings of the IEEE International Conference on Application-Specific Systems, 2007

2006

Optimal Surface Segmentation in Volumetric Images-A Graph-Theoretic Approach.

Kang Li, Xiaodong Wu, Danny Z. Chen, Milan Sonka

IEEE Trans. Pattern Anal. Mach. Intell., 2006

Construction of the nearest neighbor embracing graph of a point set.

Mee Yee Chan, Danny Z. Chen, Francis Y. L. Chin, Cao An Wang

J. Comb. Optim., 2006

Two flow network simplification algorithms.

Ewa Misiolek, Danny Z. Chen

Inf. Process. Lett., 2006

Minimum Area Convex Packing of Two Convex Polygons.

Kai Tang, Charlie C. L. Wang, Danny Z. Chen

Int. J. Comput. Geom. Appl., 2006

Generalized Geometric Approaches for Leaf Sequencing Problems in Radiation Therapy.

Danny Z. Chen, Xiaobo Sharon Hu, Shuang Luan, Shahid A. Naqvi, Chao Wang, Cedric X. Yu

Int. J. Comput. Geom. Appl., 2006

Field Splitting Problems in Intensity-Modulated Radiation Therapy.

Danny Z. Chen, Chao Wang

Proceedings of the Algorithms and Computation, 17th International Symposium, 2006

Shape Rectangularization Problems in Intensity-Modulated Radiation Therapy.

Danny Z. Chen, Xiaobo Sharon Hu, Shuang Luan, Ewa Misiolek, Chao Wang

Proceedings of the Algorithms and Computation, 17th International Symposium, 2006

On Approximating the Maximum Simple Sharing Problem.

Danny Z. Chen, Rudolf Fleischer, Jian Li, Zhiyi Xie, Hong Zhu

Proceedings of the Algorithms and Computation, 17th International Symposium, 2006

An FPGA Solution for Radiation Dose Calculation.

Kevin Whitton, Xiaobo Sharon Hu, Cedric X. Yu, Danny Z. Chen

Proceedings of the 14th IEEE Symposium on Field-Programmable Custom Computing Machines (FCCM 2006), 2006

Traversing the Machining Graph.

Danny Z. Chen, Rudolf Fleischer, Jian Li, Haitao Wang, Hong Zhu

Proceedings of the Algorithms, 2006

A Leaf Sequencing Software for Intensity-Modulated Radiation Therapy.

Shuang Luan, Chao Wang, Danny Z. Chen, Xiaobo Sharon Hu

Proceedings of the 19th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2006), 2006

2005

Efficient Algorithms and Implementations for Optimizing the Sum of Linear Fractional Functions, with Applications.

Danny Z. Chen, Ovidiu Daescu, Yang Dai, Naoki Katoh, Xiaodong Wu, Jinhui Xu

J. Comb. Optim., 2005

Geometric Algorithms for Density-based Data Clustering.

Danny Z. Chen, Michiel H. M. Smid, Bin Xu

Int. J. Comput. Geom. Appl., 2005

Polygonal path simplification with angle constraints.

Danny Z. Chen, Ovidiu Daescu, John Hershberger, Peter M. Kogge, Ningfang Mi, Jack Snoeyink

Comput. Geom., 2005

Optimal Terrain Construction Problems and Applications in Intensity-Modulated Radiation Therapy.

Danny Z. Chen, Xiaobo Sharon Hu, Shuang Luan, Xiaodong Wu, Cedric X. Yu

Algorithmica, 2005

Simultaneous Segmentation of Multiple Closed Surfaces Using Optimal Graph Searching.

Kang Li, Steven Millington, Xiaodong Wu, Danny Z. Chen, Milan Sonka

Proceedings of the Information Processing in Medical Imaging, 2005

Eliminating wire crossings for molecular quantum-dot cellular automata implementation.

Amitabh Chaudhary, Danny Z. Chen, Kevin Whitton, Michael T. Niemier, Ramprasad Ravichandran

Proceedings of the 2005 International Conference on Computer-Aided Design, 2005

Mountain reduction, block matching, and applications in intensity-modulated radiation therapy.

Danny Z. Chen, Xiaobo Sharon Hu, Chao Wang, Xiaodong Wu

Proceedings of the 21st ACM Symposium on Computational Geometry, 2005

Efficient Algorithms for Simplifying Flow Networks.

Ewa Misiolek, Danny Z. Chen

Proceedings of the Computing and Combinatorics, 11th Annual International Conference, 2005

2004

Efficient approximation algorithms for pairwise data clustering and applications.

Xiaodong Wu, Danny Z. Chen, James J. Mason, Steven R. Schmid

Int. J. Comput. Geom. Appl., 2004

Geometric algorithms for static leaf sequencing problems in radiation therapy.

Danny Z. Chen, Xiaobo Sharon Hu, Shuang (Sean) Luan, Chao Wang, Xiaodong Wu

Int. J. Comput. Geom. Appl., 2004

Geometric permutations of higher dimensional spheres.

Yingping Huang, Jinhui Xu, Danny Z. Chen

Comput. Geom., 2004

Efficient Algorithms for k-Terminal Cuts on Planar Graphs.

Danny Z. Chen, Xiaodong Wu

Algorithmica, 2004

Quantum-Dot Cellular Automata (QCA) circuit partitioning: problem modeling and solutions.

Dominic A. Antonelli, Danny Z. Chen, Timothy J. Dysart, Xiaobo Sharon Hu, Andrew B. Kahng, Peter M. Kogge, Richard C. Murphy, Michael T. Niemier

Proceedings of the 41th Design Automation Conference, 2004

Globally Optimal Segmentation of Interacting Surfaces with Geometric Constraints.

Kang Li, Xiaodong Wu, Danny Z. Chen, Milan Sonka

Proceedings of the 2004 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2004), with CD-ROM, 27 June, 2004

Approximation Algorithms for Multicommodity Flow and Normalized Cut Problems: Implementations and Experimental Study.

Ying Du, Danny Z. Chen, Xiaodong Wu

Proceedings of the Computing and Combinatorics, 10th Annual International Conference, 2004

Efficient Algorithms for Approximating a Multi-dimensional Voxel Terrain by a Unimodal Terrain.

Danny Z. Chen, Jinhee Chun, Naoki Katoh, Takeshi Tokuyama

Proceedings of the Computing and Combinatorics, 10th Annual International Conference, 2004

Optimizing The Lazy DFA Approach for XML Stream Processing.

Danny Z. Chen, Raymond K. Wong

Proceedings of the Database Technologies 2004, 2004

2003

Computing Optimal Beams in Two and Three Dimensions.

Danny Z. Chen, Xiaobo Hu, Jinhui Xu

J. Comb. Optim., 2003

Finding an optimal path without growing the tree.

Danny Z. Chen, Ovidiu Daescu, Xiaobo Hu, Jinhui Xu

J. Algorithms, 2003

Topological Peeling and Applications.

Danny Z. Chen, Shuang Luan, Jinhui Xu

Int. J. Comput. Geom. Appl., 2003

Space-Efficient Algorithms for Approximating Polygonal Curves in Two-Dimensional Space.

Danny Z. Chen, Ovidiu Daescu

Int. J. Comput. Geom. Appl., 2003

Efficient Parallel Algorithms for Planar <i>st</i>-Graphs.

Mikhail J. Atallah, Danny Z. Chen, Ovidiu Daescu

Algorithmica, 2003

Pairwise Data Clustering and Applications.

Xiaodong Wu, Danny Z. Chen, James J. Mason, Steven R. Schmid

Proceedings of the Computing and Combinatorics, 9th Annual International Conference, 2003

Geometric Algorithms for Agglomerative Hierarchical Clustering.

Danny Z. Chen, Bin Xu

Proceedings of the Computing and Combinatorics, 9th Annual International Conference, 2003

Energy minimization of real-time tasks on variable voltage processors with transition energy overhead.

Yumin Zhang, Xiaobo Sharon Hu, Danny Z. Chen

Proceedings of the 2003 Asia and South Pacific Design Automation Conference, 2003

2002

Efficient global register allocation for minimizing energy consumption.

Yumin Zhang, Xiaobo Hu, Danny Z. Chen

ACM SIGPLAN Notices, 2002

Cell selection from technology libraries for minimizing power.

Yumin Zhang, Xiaobo Sharon Hu, Danny Z. Chen

Integr., 2002

Image Segmentation with Asteroidality/Tubularity and Smoothness Constraints.

Danny Z. Chen, Jie Wang, Xiaodong Wu

Int. J. Comput. Geom. Appl., 2002

Optimal Polygon Cover Problems and Applications.

Danny Z. Chen, Xiaobo Hu, Xiaodong Wu

Int. J. Comput. Geom. Appl., 2002

Two-variable linear programming in parallel.

Danny Z. Chen, Jinhui Xu

Comput. Geom., 2002

Efficiently Approximating Polygonal Paths in Three and Higher Dimensions.

Gill Barequet, Danny Z. Chen, Ovidiu Daescu, Michael T. Goodrich, Jack Snoeyink

Algorithmica, 2002

Optimal Net Surface Problems with Applications.

Xiaodong Wu, Danny Z. Chen

Proceedings of the Automata, Languages and Programming, 29th International Colloquium, 2002

Task scheduling and voltage selection for energy minimization.

Yumin Zhang, Xiaobo Hu, Danny Z. Chen

Proceedings of the 39th Design Automation Conference, 2002

An Experimental Study and Comparison of Topological Peeling and Topological Walk.

Danny Z. Chen, Shuang Luan, Jinhui Xu

Proceedings of the Computing and Combinatorics, 8th Annual International Conference, 2002

2001

Efficient list-approximation techniques for floorplan area minimization.

Xiaobo Hu, Danny Z. Chen, Rajeshkumar S. Sambandam

ACM Trans. Design Autom. Electr. Syst., 2001

Determining an Optimal Penetration Among Weighted Regions in Two and Three Dimensions.

Danny Z. Chen, Ovidiu Daescu, Xiaobo Hu, Xiaodong Wu, Jinhui Xu

J. Comb. Optim., 2001

On Geometric Path Query Problems.

Danny Z. Chen, Ovidiu Daescu, Kevin S. Klenk

Int. J. Comput. Geom. Appl., 2001

On Connecting Red and Blue Rectilinear Polygonal Obstacles with Nonintersecting Monotone Rectilinear Paths.

Mikhail J. Atallah, Danny Z. Chen

Int. J. Comput. Geom. Appl., 2001

Efficient Algorithms for Optimization-Based Image Segmentation.

Tetsuo Asano, Danny Z. Chen, Naoki Katoh, Takeshi Tokuyama

Int. J. Comput. Geom. Appl., 2001

Lower bounds for computing geometric spanners and approximate shortest paths.

Danny Z. Chen, Gautam Das, Michiel H. M. Smid

Discret. Appl. Math., 2001

An efficient direct approach for computing shortest rectilinear paths among obstacles in a two-layer interconnection model.

Danny Z. Chen, Jinhui Xu

Comput. Geom., 2001

Geometric permutations of high dimensional spheres.

Yingping Huang, Jinhui Xu, Danny Z. Chen

Proceedings of the Twelfth Annual Symposium on Discrete Algorithms, 2001

Polygonal path approximation with angle constraints.

Danny Z. Chen, Ovidiu Daescu, John Hershberger, Peter M. Kogge, Jack Snoeyink

Proceedings of the Twelfth Annual Symposium on Discrete Algorithms, 2001

Image Segmentation with Monotonicity and Smoothness Constraints.

Danny Z. Chen, Jie Wang, Xiaodong Wu

Proceedings of the Algorithms and Computation, 12th International Symposium, 2001

Topological Peeling and Implementation.

Danny Z. Chen, Shuang Luan, Jinhui Xu

Proceedings of the Algorithms and Computation, 12th International Symposium, 2001

Algorithms for congruent sphere packing and applications.

Danny Z. Chen, Xiaobo Hu, Yingping Huang, Yifan Li, Jinhui Xu

Proceedings of the Seventeenth Annual Symposium on Computational Geometry, 2001

Maximum Red/Blue Interval Matching with Applications.

Danny Z. Chen, Xiaobo Hu, Xiaodong Wu

Proceedings of the Computing and Combinatorics, 7th Annual International Conference, 2001

2000

Shortest Path Queries Among Weighted Obstacles in the Rectilinear Plane.

Danny Z. Chen, Kevin S. Klenk, Hung-Yi Tu

SIAM J. Comput., 2000

Parallel Algorithms for Partitioning Sorted Sets and Related Problems.

Danny Z. Chen, Wei Chen, Koichi Wada, Kimio Kawaguchi

Algorithmica, 2000

Parallel Algorithms for Maximum Matching in Complements of Interval Graphs and Related Problems.

Marilyn G. Andrews, Mikhail J. Atallah, Danny Z. Chen, D. T. Lee

Algorithmica, 2000

Shortest path queries in planar graphs.

Danny Z. Chen, Jinhui Xu

Proceedings of the Thirty-Second Annual ACM Symposium on Theory of Computing, 2000

Optimizing the sum of linear fractional functions and applications.

Danny Z. Chen, Ovidiu Daescu, Yang Dai, Naoki Katoh, Xiaodong Wu, Jinhui Xu

Proceedings of the Eleventh Annual ACM-SIAM Symposium on Discrete Algorithms, 2000

A new algorithm and simulation for computing optimal paths in a dynamic and weighted 2-D environment.

Bin Xu, Danny Z. Chen, Robert J. Szczerba

Proceedings of the IEEE International Conference on Systems, 2000

Optimal Beam Penetrations in Two and Three Dimensions.

Danny Z. Chen, Xiaobo Hu, Jinhui Xu

Proceedings of the Algorithms and Computation, 11th International Conference, 2000

Optimal Polygon Cover Problems and Applcations.

Danny Z. Chen, Xiaobo Hu, Xiaodong Wu

Proceedings of the Algorithms and Computation, 11th International Conference, 2000

Determining optimal paths in a weighted and dynamic 2D environment using framed-octrees.

Bin Xu, Danny Z. Chen, Robert J. Szczerba

Proceedings of the Fourth International Conference on Autonomous Agents, 2000

Deterministic Parallel Computational Geometry.

Mikhail J. Atallah, Danny Z. Chen

Proceedings of the Handbook of Computational Geometry, 2000

1999

Parallel Algorithms for Longest Increasing Chains in the Plane and Related Problems.

Mikhail J. Atallah, Danny Z. Chen, Kevin S. Klenk

Parallel Process. Lett., 1999

Skew Voronoi Diagrams.

Oswin Aichholzer, Franz Aurenhammer, Danny Z. Chen, D. T. Lee, Evanthia Papadopoulou

Int. J. Comput. Geom. Appl., 1999

Global register allocation for minimizing energy consumption.

Yumin Zhang, Xiaobo Hu, Danny Z. Chen

Proceedings of the 1999 International Symposium on Low Power Electronics and Design, 1999

Low energy register allocation beyond basic blocks.

Yumin Zhang, Xiaobo Hu, Danny Z. Chen

Proceedings of the 1999 International Symposium on Circuits and Systems, ISCAS 1999, Orlando, Florida, USA, May 30, 1999

1998

Solving the all-pair shortest path query problem on interval and circular-arc graphs.

Danny Z. Chen, D. T. Lee, R. Sridhar, Chandra N. Sekharan

Networks, 1998

Maintaining Visibility of a Polygon with a Moving Point of View.

Danny Z. Chen, Ovidiu Daescu

Inf. Process. Lett., 1998

Planning Shortest Paths among 2D and 3D Weighted Regions Using Framed-Subspaces.

Robert J. Szczerba, Danny Z. Chen, John J. Uhran Jr.

Int. J. Robotics Res., 1998

Finding the Convex Hull of Discs in Parallel.

Wei Chen, Koichi Wada, Kimio Kawaguchi, Danny Z. Chen

Int. J. Comput. Geom. Appl., 1998

Determining Weak Visibility of a Polygon from an Edge in Parallel.

Danny Z. Chen

Int. J. Comput. Geom. Appl., 1998

Parallel Geometric Algorithms in Coarse-Grain Network Models.

Mikhail J. Atallah, Danny Z. Chen

Proceedings of the Computing and Combinatorics, 4th Annual International Conference, 1998

1997

A framed-quadtree approach for determining Euclidean shortest paths in a 2-D environment.

Danny Z. Chen, Robert J. Szczerba, John J. Uhran Jr.

IEEE Trans. Robotics Autom., 1997

Scheduling for power reduction in a real-time system.

Jason J. Brown, Danny Z. Chen, Garrison W. Greenwood, Xiaobo Hu, Richard W. Taylor

Proceedings of the 1997 International Symposium on Low Power Electronics and Design, 1997

Voronoi Diagrams for Direction-Sensitive Distances.

Oswin Aichholzer, Franz Aurenhammer, Danny Z. Chen, D. T. Lee, Asish Mukhopadhyay, Evanthia Papadopoulou

Proceedings of the Thirteenth Annual Symposium on Computational Geometry, 1997

1996

Fast and Efficient Operations on Parallel Priority Queues.

Danny Z. Chen, Xiaobo Sharon Hu

Parallel Process. Lett., 1996

Optimally Computing the Shortest Weakly Visible Subedge of a Simple Polygon.

Danny Z. Chen

J. Algorithms, 1996

Erratum: Rectilinear Short Path Queries Among Rectangular Obstacles.

Danny Z. Chen, Kevin S. Klenk

Inf. Process. Lett., 1996

Rectilinear Short Path Queries Among Rectangular Obstacles.

Danny Z. Chen, Kevin S. Klenk

Inf. Process. Lett., 1996

Developing Algorithms and Software for Geometric Path Planning Problems.

Danny Z. Chen

ACM Comput. Surv., 1996

Polynomial-Time Solutions to Image Segmentation.

Tetsuo Asano, Danny Z. Chen, Naoki Katoh, Takeshi Tokuyama

Proceedings of the Seventh Annual ACM-SIAM Symposium on Discrete Algorithms, 1996

Applications of a Numbering Scheme for Polygonal Obstacles in the Plane.

Mikhail J. Atallah, Danny Z. Chen

Proceedings of the Algorithms and Computation, 7th International Symposium, 1996

Planar Spanners and Approximate Shortest Path Queries among Obstacles in the Plane.

Srinivasa Rao Arikati, Danny Z. Chen, L. Paul Chew, Gautam Das, Michiel H. M. Smid, Christos D. Zaroliagis

Proceedings of the Algorithms, 1996

Efficient Approximation Algorithms for Floorplan Area Minimization.

Danny Z. Chen, Xiaobo Hu

Proceedings of the 33st Conference on Design Automation, 1996

1995

Efficient Parallel Binary Search on Sorted Arrays, with Applications.

Danny Z. Chen

IEEE Trans. Parallel Distributed Syst., 1995

Efficient Geometric Algorithms on the EREW PRAM.

Danny Z. Chen

IEEE Trans. Parallel Distributed Syst., 1995

Optimal Parallel Hypercube Algorithms for Polygon Problems.

Mikhail J. Atallah, Danny Z. Chen

IEEE Trans. Computers, 1995

An optimal parallel algorithm for detecting weak visibility of a simple polygon.

Danny Z. Chen

Int. J. Comput. Geom. Appl., 1995

Computing the all-pairs longest chains in the plane.

Mikhail J. Atallah, Danny Z. Chen

Int. J. Comput. Geom. Appl., 1995

An Optimal Algorithm for Shortest Paths on Weighted Interval and Circular-Arc Graphs, with Applications.

Mikhail J. Atallah, Danny Z. Chen, D. T. Lee

Algorithmica, 1995

Weighted selection on coarse-grain hypercubes.

Danny Z. Chen, Ajay K. Gupta

Proceedings of the Seventh IEEE Symposium on Parallel and Distributed Processing, 1995

On the All-Pairs Euclidean Short Path Problem.

Danny Z. Chen

Proceedings of the Sixth Annual ACM-SIAM Symposium on Discrete Algorithms, 1995

Planning conditional shortest paths through an unknown environment: a framed-quadtree approach.

Danny Z. Chen, Robert J. Szczerba, John J. Uhran Jr.

Proceedings of IEEE/RSJ International Conference on Intelligent Robots and Systems, 1995

Parallel algorithms for maximum matching in interval graphs.

Marilyn G. Andrews, Mikhail J. Atallah, Danny Z. Chen, D. T. Lee

Proceedings of IPPS '95, 1995

Optimal guarding of polygons and monotone chains.

Danny Z. Chen, Vladimir Estivill-Castro, Jorge Urrutia

Proceedings of the 7th Canadian Conference on Computational Geometry, 1995

1994

Solving the All-Pair Shortest Path Problem on Interval and Circular-Arc Graphs.

Danny Z. Chen, D. T. Lee

Proceedings of the 8th International Symposium on Parallel Processing, 1994

Determining Weak External Visibility of Polygons in Parallel.

Danny Z. Chen

Proceedings of the 6th Canadian Conference on Computational Geometry, 1994

1993

Testing a Simple Polygon for Monotonicity Optimally in Parallel.

Danny Z. Chen, Sumanta Guha

Inf. Process. Lett., 1993

On Parallel Rectilinear Obstacle- Avoiding Paths.

Mikhail J. Atallah, Danny Z. Chen

Comput. Geom., 1993

Computing the All-Pairs Longest Chain in the Plane.

Mikhail J. Atallah, Danny Z. Chen

Proceedings of the Algorithms and Data Structures, Third Workshop, 1993

Testing a Simple Polygon for Monotonicity Optimality in Parallel.

Danny Z. Chen, Sumanta Guha

Proceedings of the Seventh International Parallel Processing Symposium, 1993

1991

An Optimal Parallel Algorithm for the Visibility of a Simple Polygon from a Point.

Mikhail J. Atallah, Danny Z. Chen, Hubert Wagener

J. ACM, 1991

Parallel Rectilinear Shortest Paths with Rectangular Obstacles.

Mikhail J. Atallah, Danny Z. Chen

Comput. Geom., 1991

1989

An Optimal Parallel Algorithm for the Minimum Circle-Cover Problem.

Mikhail J. Atallah, Danny Z. Chen

Inf. Process. Lett., 1989

Optimal Parallel Algorithm for Visibility of a Simple Polygon from a Point.

Mikhail J. Atallah, Danny Z. Chen

Proceedings of the Fifth Annual Symposium on Computational Geometry, 1989